myRT

myRT report for GCA_003151985.1_20120700_P3D

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Seq: PLZC01000153.1 Acidobacteriaceae bacterium isolate palsa_352 73.20120700_P3D.197_contig_22902, whole genome shotgun sequence (5738 bp)
Overview 1 RT 1: 4896-5738 bp Neighborhood of RT #1 [4896, 5737] RVT-GII Feature: gene Location: 4896-5066 bp Feature: gene Location: 5074-5397 bp Feature: gene Location: 5396-5737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5600-5738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5600-5738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PLZC01000169.1 Acidobacteriaceae bacterium isolate palsa_352 73.20120700_P3D.197_contig_33161, whole genome shotgun sequence (49698 bp)
Overview 1 RT 1: 1398-6995 bp Neighborhood of RT #1 [1398, 7033] PRK09692 PRK09692 KOG0274 KOG4283 RVT-GII choice_anch_D choice_anch_D Feature: gene Location: 1398-2372 bp Feature: domain Description: PRK09692 Location: 1485-1932 bp Feature: domain Description: PRK09692 Location: 1485-1932 bp Feature: domain Description: PRK09692 Location: 1956-2313 bp Feature: domain Description: PRK09692 Location: 1956-2 313 bp Feature: gene Location: 2426-3127 bp Feature: domain Description: KOG0274 Location: 2435-2939 bp Feature: domain Description: KOG02 74 Location: 2 435-2 939 bp Feature: domain Description: KOG4283 Location: 2960-3065 bp Feature: domain Description: KOG42 83 Location: 2 960-3065 bp Feature: gene Location: 3055-4020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3343-3898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3343-3898 bp Feature: gene Location: 4053-4262 bp Feature: gene Location: 4820-7033 bp Feature: domain Description: choice_anch_D Location: 6356-6662 bp Feature: domain Description: choice_anch_D Location: 6356-6662 bp Feature: domain Description: choice_anch_D Location: 6671-6995 bp Feature: domain Description: choice_anch_D Location: 6671-6995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), KOG0274 (KOG0274, Cdc4 and related F-box and WD-40 proteins ), KOG4283 (KOG4283, Transcription-coupled repair protein CSA, contains WD40 domain ), RVT-GII, choice_anch_D (NF012200)

Seq: PLZC01000247.1 Acidobacteriaceae bacterium isolate palsa_352 73.20120700_P3D.197_contig_46531, whole genome shotgun sequence (16219 bp)
Overview 1 RT 1: 3-1027 bp Neighborhood of RT #1 [3, 1027] RVT-GII Feature: gene Location: 3-611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-603 bp Feature: gene Location: 605-829 bp Feature: gene Location: 857-1027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII