myRT

myRT report for GCA_003152075.1_20120700_P3D

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Seq: PLZG01000014.1 Candidate division FCPU426 bacterium isolate palsa_1180 73.20120700_P3D.179_contig_206977, whole genome shotgun sequence (13563 bp)
Overview 1 RT 1: 5590-8675 bp Neighborhood of RT #1 [5590, 8788] gmx_gmx_gmx_TIGR02266 RVT-GII GIIM OMP_b-brl_2 Feature: gene Location: 5590-5961 bp Feature: domain Description: gmx_gmx_gmx_TIGR02266 Location: 5713-5932 bp Feature: domain Description: gmx_gmx_gmx_TIGR02266 Location: 571 3-5932 bp Feature: gene Location: 6150-6362 bp Feature: gene Location: 6551-7918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6902-7541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6902-7541 bp Feature: domain Description: GIIM Note: maturase Location: 7616-7814 bp Feature: domain Description: GIIM Note: maturase Location: 761 6-781 4 bp Feature: gene Location: 7939-8085 bp Feature: gene Location: 8123-8788 bp Feature: domain Description: OMP_b-brl_2 Location: 8213-8675 bp Feature: domain Description: OMP_b-brl_2 Location: 821 3-8675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gmx_gmx_gmx_TIGR02266, RVT-GII, GIIM (pfam08388), OMP_b-brl_2 (pfam13568)

Seq: PLZG01000053.1 Candidate division FCPU426 bacterium isolate palsa_1180 73.20120700_P3D.179_contig_215101, whole genome shotgun sequence (6509 bp)
Overview 1 RT 1: 588-3098 bp Neighborhood of RT #1 [588, 3098] RVT-GII RVT-CRISPR-like GIIM Feature: gene Location: 588-728 bp Feature: gene Location: 901-1077 bp Feature: gene Location: 1249-1887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1546-1879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1546-1879 bp Feature: gene Location: 1942-2565 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1945-2161 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1945-2 161 bp Feature: domain Description: GIIM Note: maturase Location: 2275-2470 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 75-2 470 bp Feature: gene Location: 2460-2846 bp Feature: gene Location: 2931-3098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT-CRISPR, GIIM (pfam08388)

Seq: PLZG01000039.1 Candidate division FCPU426 bacterium isolate palsa_1180 73.20120700_P3D.179_contig_72003, whole genome shotgun sequence (21364 bp)
Overview 1 RT 1: 2-3255 bp Neighborhood of RT #1 [2, 3272] RVT-GII TPR TPR TPR Feature: gene Location: 2-529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284-518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284-518 bp Feature: gene Location: 517-1083 bp Feature: gene Location: 1236-3272 bp Feature: domain Description: TPR Location: 2565-2754 bp Feature: domain Description: TPR Location: 2565-2754 bp Feature: domain Description: TPR Location: 2760-2949 bp Feature: domain Description: TPR Location: 2760-2949 bp Feature: domain Description: TPR Location: 2982-3255 bp Feature: domain Description: TPR Location: 2982-3 255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), RVT-GII