myRT

myRT report for GCA_003152255.1_20120700_P3D

Download annotations/find similar RTs

Seq: PLZT01000550.1 Methylocystaceae bacterium isolate palsa_923 73.20120700_P3D.113_contig_20338, whole genome shotgun sequence (9433 bp)
Overview 1 RT 1: 1624-9068 bp Neighborhood of RT #1 [1624, 9070] HAD_PPase DNA_pol_B_exo2 RVT-UG1 MFS_ExuT_GudP_like MFS_ExuT_GudP_like Feature: gene Location: 1624-2424 bp Feature: domain Description: HAD_PPase Location: 1675-2419 bp Feature: domain Description: HAD_PPase Location: 1 675-241 9 bp Feature: gene Location: 2623-3414 bp Feature: domain Description: DNA_pol_B_exo2 Location: 2776-3409 bp Feature: domain Description: DNA_pol_B_exo2 Location: 2776-3409 bp Feature: gene Location: 3389-7450 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4304-4793 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4304-4793 bp Feature: gene Location: 7760-7996 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 7763-7967 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 7763-7967 bp Feature: gene Location: 8153-9070 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 8237-9068 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 8237-9068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD_PPase (cd07509), DNA_pol_B_exo2 (pfam10108), RVT-UG1, MFS_ExuT_GudP_like (cd17319)

Seq: PLZT01000485.1 Methylocystaceae bacterium isolate palsa_923 73.20120700_P3D.113_contig_90001, whole genome shotgun sequence (21426 bp)
Overview 1 RT 1: 5333-7292 bp Neighborhood of RT #1 [5333, 7327] WbqC RVT-GII GIIM DUF5372 Feature: gene Location: 5333-5662 bp Feature: domain Description: WbqC Location: 5354-5654 bp Feature: domain Description: WbqC Location: 5354-5654 bp Feature: gene Location: 5729-5887 bp Feature: gene Location: 6003-6671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6009-6279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6009-62 79 bp Feature: domain Description: GIIM Note: maturase Location: 6363-6582 bp Feature: domain Description: GIIM Note: maturase Location: 6363-6582 bp Feature: gene Location: 6231-7115 bp Feature: gene Location: 7142-7327 bp Feature: domain Description: DUF5372 Location: 7148-7292 bp Feature: domain Description: DUF5372 Location: 7148-72 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WbqC (pfam08889), RVT-GII, GIIM (pfam08388), DUF5372 (pfam17342)