myRT

myRT report for GCA_003152815.1_20120700_E3M

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Seq: PMBB01000150.1 Candidate division WOR-3 bacterium isolate 3_fen 73.20120700_E3M.91_contig_102017, whole genome shotgun sequence (11422 bp)
Overview 1 RT 1: 2614-6440 bp Neighborhood of RT #1 [2614, 6440] RVT-GII Rbg1 Rbg1 Feature: gene Location: 2614-2763 bp Feature: gene Location: 2863-3057 bp Feature: gene Location: 3220-4878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3820-4501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3820-4501 bp Feature: gene Location: 5185-6225 bp Feature: domain Description: Rbg1 Location: 5248-5746 bp Feature: domain Description: Rbg1 Location: 5248-5746 bp Feature: domain Description: Rbg1 Location: 5863-6220 bp Feature: domain Description: Rbg1 Location: 5863-6220 bp Feature: gene Location: 6228-6440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Rbg1 (COG1163)

Seq: PMBB01000329.1 Candidate division WOR-3 bacterium isolate 3_fen 73.20120700_E3M.91_contig_423173, whole genome shotgun sequence (15394 bp)
Overview 1 RT 1: 3-3792 bp Neighborhood of RT #1 [3, 3845] sigpep_I_arch group_II_RT_mat RVT-UG21 YjbM Feature: gene Location: 3-314 bp Feature: domain Description: sigpep_I_arch Location: 138-294 bp Feature: domain Description: sigpep_I_arch Location: 138-2 94 bp Feature: gene Location: 510-2105 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 636-795 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 636-795 bp Feature: RT Description: RVT-UG21 Note: UG21 RT Location: 939-1353 bp Feature: RT Description: RVT-UG2 1 Note: UG2 1 RT Location: 939-1353 bp Feature: gene Location: 2170-3189 bp Feature: gene Location: 3354-3845 bp Feature: domain Description: YjbM Location: 3372-3792 bp Feature: domain Description: YjbM Location: 3372 -3792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sigpep_I_arch (TIGR02228), group_II_RT_mat (TIGR04416), RVT-UG21, YjbM (COG2357)