myRT

myRT report for GCA_003153495.1_20120700_P3D

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Seq: PLYU01000189.1 Myxococcales bacterium isolate palsa_1150 73.20120700_P3D.239_contig_196778, whole genome shotgun sequence (15373 bp)
Overview 1 RT 1: 149-2373 bp Neighborhood of RT #1 [149, 2373] RVT-GII LysR Feature: gene Location: 149-349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155-323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 55-323 bp Feature: gene Location: 982-1938 bp Feature: domain Description: LysR Location: 991-1843 bp Feature: domain Description: LysR Location: 991 -1 843 bp Feature: gene Location: 2083-2373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LysR (COG0583)

Seq: PLYU01000380.1 Myxococcales bacterium isolate palsa_1150 73.20120700_P3D.239_contig_205173, whole genome shotgun sequence (7670 bp)
Overview 1 RT 1: 48-3884 bp Neighborhood of RT #1 [48, 3895] RVT-GII RVT-GII VapC Feature: gene Location: 48-365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165-354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165-354 bp Feature: gene Location: 369-707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-684 bp Feature: gene Location: 1202-3526 bp Feature: gene Location: 3644-3895 bp Feature: domain Description: VapC Location: 3689-3884 bp Feature: domain Description: VapC Location: 3689-3884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, VapC (COG1487)

Seq: PLYU01000322.1 Myxococcales bacterium isolate palsa_1150 73.20120700_P3D.239_contig_220209, whole genome shotgun sequence (12975 bp)
Overview 1 RT 1: 216-7235 bp Neighborhood of RT #1 [216, 7235] DAP2 RVT-GII Feature: gene Location: 216-2051 bp Feature: gene Location: 2289-3548 bp Feature: domain Description: DAP2 Location: 2592-3333 bp Feature: domain Description: DAP2 Location: 2592-3 3 3 3 bp Feature: gene Location: 4340-5599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4622-5195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4622-5195 bp Feature: gene Location: 5671-5988 bp Feature: gene Location: 6258-7235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DAP2 (COG1506), RVT-GII

Seq: PLYU01000351.1 Myxococcales bacterium isolate palsa_1150 73.20120700_P3D.239_contig_310025, whole genome shotgun sequence (14487 bp)
Overview 1 RT 1: 210-2777 bp Neighborhood of RT #1 [210, 2782] RVT-GII TIGR02436 PRK12275 Feature: gene Location: 210-1481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 17-1107 bp Feature: gene Location: 2103-2396 bp Feature: domain Description: TIGR02436 Location: 2124-2394 bp Feature: domain Description: TIGR024 36 Location: 2124 -2394 bp Feature: gene Location: 2444-2782 bp Feature: domain Description: PRK12275 Location: 2465-2777 bp Feature: domain Description: PRK12275 Location: 24 65-2777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TIGR02436 (four helix bundle protein), PRK12275 (hypothetical protein; Reviewed)

Seq: PLYU01000307.1 Myxococcales bacterium isolate palsa_1150 73.20120700_P3D.239_contig_36287, whole genome shotgun sequence (26649 bp)
Overview 1 RT 1: 7493-11438 bp Neighborhood of RT #1 [7493, 11438] RVT-Retrons HTH_3 Feature: gene Location: 7493-8020 bp Feature: gene Location: 8131-9576 bp Feature: gene Location: 9940-10845 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10081-10633 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10081-10633 bp Feature: gene Location: 10851-11129 bp Feature: domain Description: HTH_3 Location: 10881-11031 bp Feature: domain Description: HTH_3 Location: 10881-11031 bp Feature: gene Location: 11229-11438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_3 (pfam01381)

Seq: PLYU01000208.1 Myxococcales bacterium isolate palsa_1150 73.20120700_P3D.239_contig_74432, whole genome shotgun sequence (4083 bp)
Overview 1 RT 1: 153-4061 bp Neighborhood of RT #1 [153, 4081] DltE DUF433 RVT-GII TIGR02436 Feature: gene Location: 153-962 bp Feature: domain Description: DltE Location: 174-936 bp Feature: domain Description: DltE Location: 174-936 bp Feature: gene Location: 1473-1721 bp Feature: domain Description: DUF433 Location: 1506-1671 bp Feature: domain Description: DUF433 Location: 1506 -16 71 bp Feature: gene Location: 2521-3768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2725-3409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2725-3409 bp Feature: gene Location: 3917-4081 bp Feature: domain Description: TIGR02436 Location: 3986-4061 bp Feature: domain Description: TIGR02436 Location: 3986 -406 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DltE (COG3967), DUF433 (pfam04255), RVT-GII, TIGR02436 (four helix bundle protein)