myRT

myRT report for GCA_003154025.1_20120700_E3M

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Seq: PMCE01000479.1 Syntrophaceae bacterium isolate fen_1141 73.20120700_E3M.214_contig_174524, whole genome shotgun sequence (20659 bp)
Overview 1 RT 1: 17452-20640 bp Neighborhood of RT #1 [17452, 20640] DDE_Tnp_ISAZ013 RVT-GII Feature: gene Location: 17452-17685 bp Feature: gene Location: 17692-18921 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 17977-18889 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 1 7977-1 8889 bp Feature: gene Location: 19279-20145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19282-19909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9282-1 9909 bp Feature: gene Location: 20482-20640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT-GII

Seq: PMCE01000525.1 Syntrophaceae bacterium isolate fen_1141 73.20120700_E3M.214_contig_2653963, whole genome shotgun sequence (2539 bp)
Overview 1 RT 1: 3-845 bp Neighborhood of RT #1 [3, 845] RVT-GII Feature: gene Location: 3-254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111-255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111-2 55 bp Feature: gene Location: 308-505 bp Feature: gene Location: 600-845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PMCE01000568.1 Syntrophaceae bacterium isolate fen_1141 73.20120700_E3M.214_contig_42656, whole genome shotgun sequence (8455 bp)
Overview 1 RT 1: 3382-8427 bp Neighborhood of RT #1 [3382, 8447] iPGM iPGM iPGM PLDc_N_Snf2_like group_II_RT_mat RVT-UG19 COG4637 COG4637 Feature: gene Location: 3382-4860 bp Feature: domain Description: iPGM Location: 3388-4285 bp Feature: domain Description: iPGM Location: 3 3 88-4285 bp Feature: domain Description: iPGM Location: 4321-4759 bp Feature: domain Description: iPGM Location: 43 21-4759 bp Feature: domain Description: iPGM Location: 4771-4846 bp Feature: domain Description: iPGM Location: 4771-4846 bp Feature: gene Location: 5111-5506 bp Feature: domain Description: PLDc_N_Snf2_like Location: 5123-5444 bp Feature: domain Description: PLDc_N_Snf2_like Location: 5123 -5444 bp Feature: gene Location: 5509-7605 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5623-5800 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5623 -5800 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 5872-6343 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 5872-63 43 bp Feature: gene Location: 7719-8447 bp Feature: domain Description: COG4637 Location: 7740-7929 bp Feature: domain Description: COG463 7 Location: 7740-7929 bp Feature: domain Description: COG4637 Location: 8268-8427 bp Feature: domain Description: COG463 7 Location: 8268-8427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT iPGM (cd16010), PLDc_N_Snf2_like (cd09178), group_II_RT_mat (TIGR04416), RVT-UG19, COG4637 (Predicted ATPase )