myRT

myRT report for GCA_003154575.1_20120700_E2X

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Seq: PMDR01000691.1 Anaerolineae bacterium isolate fen_1058 73.20120700_E2X.203_contig_10375, whole genome shotgun sequence (2848 bp)
Overview 1 RT 1: 43-2710 bp Neighborhood of RT #1 [43, 2736] TIGR02436 RVT-CRISPR Csx1_III-U Feature: gene Location: 43-396 bp Feature: domain Description: TIGR02436 Location: 64-382 bp Feature: domain Description: TIGR02436 Location: 64-382 bp Feature: gene Location: 633-1586 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 834-1476 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 834-1 476 bp Feature: gene Location: 1939-2736 bp Feature: domain Description: Csx1_III-U Location: 2536-2710 bp Feature: domain Description: Csx1 _III-U Location: 2536-271 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02436 (four helix bundle protein), RVT-CRISPR, Csx1_III-U (cl21570)

Seq: PMDR01000433.1 Anaerolineae bacterium isolate fen_1058 73.20120700_E2X.203_contig_127973, whole genome shotgun sequence (33920 bp)
Overview 1 RT 1: 17269-23121 bp Neighborhood of RT #1 [17269, 23129] Era_like COG3597 RVT-CRISPR Cas1_I-II-III RNase_HI_like Feature: gene Location: 17269-18957 bp Feature: gene Location: 19066-20205 bp Feature: domain Description: Era_like Location: 19252-19657 bp Feature: domain Description: Era_like Location: 192 52 -19657 bp Feature: domain Description: COG3597 Location: 19756-20077 bp Feature: domain Description: COG3597 Location: 19756-2 0077 bp Feature: gene Location: 20425-21507 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 20827-21451 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 082 7-2 1451 bp Feature: gene Location: 21604-22635 bp Feature: domain Description: Cas1_I-II-III Location: 21613-22597 bp Feature: domain Description: Cas1_I-II-III Location: 2 1613-2 2 597 bp Feature: gene Location: 22725-23129 bp Feature: domain Description: RNase_HI_like Location: 22746-23121 bp Feature: domain Description: RNase_HI_like Location: 2 2 746-2 312 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Era_like (cd00880), COG3597 (Uncharacterized conserved protein, DUF697 family ), RVT-CRISPR, Cas1_I-II-III (cl00656), RNase_HI_like (cd09279)

Seq: PMDR01000851.1 Anaerolineae bacterium isolate fen_1058 73.20120700_E2X.203_contig_3000, whole genome shotgun sequence (4447 bp)
Overview 1 RT 1: 50-4446 bp Neighborhood of RT #1 [50, 4446] AdoMet_MTases RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 50-1084 bp Feature: domain Description: AdoMet_MTases Location: 158-500 bp Feature: domain Description: AdoMet_MTases Location: 158-500 bp Feature: gene Location: 1188-1496 bp Feature: gene Location: 2115-2528 bp Feature: domain Description: RVT_N Location: 2124-2346 bp Feature: domain Description: RVT_N Location: 2124-23 46 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409-2496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409-2496 bp Feature: gene Location: 2528-3814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2531-2972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253 1-2972 bp Feature: domain Description: GIIM Note: maturase Location: 3044-3269 bp Feature: domain Description: GIIM Note: maturase Location: 3 044-3 269 bp Feature: domain Description: HNHc Note: nucleases Location: 3620-3788 bp Feature: domain Description: HNHc Note: nucleases Location: 3 620-3 788 bp Feature: gene Location: 3985-4446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdoMet_MTases (cl17173), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: PMDR01000358.1 Anaerolineae bacterium isolate fen_1058 73.20120700_E2X.203_contig_61, whole genome shotgun sequence (6172 bp)
Overview 1 RT 1: 2-4636 bp Neighborhood of RT #1 [2, 4638] PRK12740 RVT-GII PRK13685 PRK13685 PRK13685 PRK13685 Feature: gene Location: 2-1819 bp Feature: domain Description: PRK12740 Location: 47-1820 bp Feature: domain Description: PRK1274 0 Location: 4 7-1820 bp Feature: gene Location: 2081-2218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2090-2186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2090-2186 bp Feature: gene Location: 2392-3525 bp Feature: domain Description: PRK13685 Location: 2410-3136 bp Feature: domain Description: PRK13685 Location: 24 10-3136 bp Feature: domain Description: PRK13685 Location: 3310-3505 bp Feature: domain Description: PRK13685 Location: 3310-3505 bp Feature: gene Location: 3616-4638 bp Feature: domain Description: PRK13685 Location: 3625-4150 bp Feature: domain Description: PRK13685 Location: 3625-4 150 bp Feature: domain Description: PRK13685 Location: 4261-4636 bp Feature: domain Description: PRK13685 Location: 4 261-4 636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12740 (elongation factor G-like protein EF-G2), RVT-GII, PRK13685 (hypothetical protein; Provisional)

Seq: PMDR01000126.1 Anaerolineae bacterium isolate fen_1058 73.20120700_E2X.203_contig_949779, whole genome shotgun sequence (8070 bp)
Overview 1 RT 1: 2-5283 bp Neighborhood of RT #1 [2, 5283] YfmG RVT-DGRs COG5635 pfam03781 Feature: gene Location: 2-493 bp Feature: domain Description: YfmG Location: 83-218 bp Feature: domain Description: YfmG Location: 83-218 bp Feature: gene Location: 580-1644 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 769-1414 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 769-1414 bp Feature: gene Location: 1650-4712 bp Feature: domain Description: COG5635 Location: 2277-3447 bp Feature: domain Description: COG5 635 Location: 2277-3447 bp Feature: domain Description: pfam03781 Location: 3876-4698 bp Feature: domain Description: pfam03781 Location: 3876-4698 bp Feature: gene Location: 4924-5283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)