myRT

myRT report for GCA_003155895.1_20120700_E1D

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Seq: PMER01000364.1 Myxococcales bacterium isolate fen_1129 73.20120700_E1D.9_contig_15062, whole genome shotgun sequence (5524 bp)
Overview 1 RT 1: 2467-5478 bp Neighborhood of RT #1 [2467, 5522] Phage_integrase TPR_2 TPR_2 PEGA PEGA RVT-DGRs Feature: gene Location: 2467-4059 bp Feature: domain Description: Phage_integrase Location: 2530-2950 bp Feature: domain Description: Phage_integrase Location: 2530-2950 bp Feature: domain Description: TPR_2 Location: 3244-3322 bp Feature: domain Description: TPR_2 Location: 3244-3322 bp Feature: domain Description: TPR_2 Location: 3337-3403 bp Feature: domain Description: TPR_2 Location: 3337-3403 bp Feature: domain Description: PEGA Location: 3502-3700 bp Feature: domain Description: PEGA Location: 3502-3700 bp Feature: domain Description: PEGA Location: 3748-3949 bp Feature: domain Description: PEGA Location: 3748-3949 bp Feature: gene Location: 3938-4744 bp Feature: gene Location: 4653-5522 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4839-5478 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4839-5478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), TPR_2 (pfam07719), PEGA (pfam08308), RVT-DGRs

Seq: PMER01000426.1 Myxococcales bacterium isolate fen_1129 73.20120700_E1D.9_contig_5983, whole genome shotgun sequence (9446 bp)
Overview 1 RT 1: 7982-9400 bp Neighborhood of RT #1 [7982, 9444] RVT-DGRs Feature: gene Location: 7982-8281 bp Feature: gene Location: 8345-8527 bp Feature: gene Location: 8215-9444 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8761-9400 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8761-9400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: PMER01000021.1 Myxococcales bacterium isolate fen_1129 73.20120700_E1D.9_contig_703, whole genome shotgun sequence (19060 bp)
Overview 1 RT 1: 611-7439 bp Neighborhood of RT #1 [611, 7439] XerC YhdJ RVT-CRISPR-like Noc_N Feature: gene Location: 611-1885 bp Feature: domain Description: XerC Location: 932-1859 bp Feature: domain Description: XerC Location: 93 2-1859 bp Feature: gene Location: 2104-3027 bp Feature: domain Description: YhdJ Location: 2194-2869 bp Feature: domain Description: YhdJ Location: 2194-2869 bp Feature: gene Location: 3221-5551 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3458-4001 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3 458-4001 bp Feature: gene Location: 5578-7011 bp Feature: domain Description: Noc_N Location: 6061-6337 bp Feature: domain Description: Noc_N Location: 6061-63 3 7 bp Feature: gene Location: 7287-7439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhdJ (COG0863), RVT-CRISPR, Noc_N (cd16396), XerC (COG4973)