myRT

myRT report for GCA_003156175.1_20120600_S2D

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Seq: PMGJ01000138.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1434 73.20120600_S2D.9_contig_26355, whole genome shotgun sequence (4260 bp)
Overview 1 RT 1: 2-2331 bp Neighborhood of RT #1 [2, 2384] RVT-GII xerC Feature: gene Location: 2-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-935 bp Feature: gene Location: 311-1225 bp Feature: gene Location: 1299-2384 bp Feature: domain Description: xerC Location: 1404-2331 bp Feature: domain Description: xerC Location: 1 404-2331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), RVT-GII

Seq: PMGJ01000260.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1434 73.20120600_S2D.9_contig_339, whole genome shotgun sequence (18735 bp)
Overview 1 RT 1: 12570-15612 bp Neighborhood of RT #1 [12570, 15612] HTH_XRE RVT_N RVT-GII GIIM Feature: gene Location: 12570-12755 bp Feature: gene Location: 12787-13188 bp Feature: domain Description: HTH_XRE Location: 13012-13174 bp Feature: domain Description: HTH_XRE Location: 13012 -13174 bp Feature: gene Location: 13319-14827 bp Feature: RT Description: RVT_N Location: 13370-13613 bp Feature: RT Description: RVT_N Location: 13370-13613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13658-14303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13658-14303 bp Feature: domain Description: GIIM Note: maturase Location: 14363-14591 bp Feature: domain Description: GIIM Note: maturase Location: 14363-14591 bp Feature: gene Location: 14912-15184 bp Feature: gene Location: 15427-15612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PMGJ01000270.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1434 73.20120600_S2D.9_contig_41022, whole genome shotgun sequence (5258 bp)
Overview 1 RT 1: 133-2402 bp Neighborhood of RT #1 [133, 2402] RVT_N RVT-GII GIIM Feature: gene Location: 133-1641 bp Feature: RT Description: RVT_N Location: 184-427 bp Feature: RT Description: RVT_N Location: 184-427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472-1117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472-1117 bp Feature: domain Description: GIIM Note: maturase Location: 1174-1405 bp Feature: domain Description: GIIM Note: maturase Location: 1174-1405 bp Feature: gene Location: 1614-2024 bp Feature: gene Location: 2118-2402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PMGJ01000058.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1434 73.20120600_S2D.9_contig_5893, whole genome shotgun sequence (10069 bp)
Overview 1 RT 1: 7708-10054 bp Neighborhood of RT #1 [7708, 10068] RVT_N RVT-GII GIIM Feature: gene Location: 7708-8091 bp Feature: gene Location: 8185-9387 bp Feature: gene Location: 8782-10068 bp Feature: RT Description: RVT_N Location: 8833-9076 bp Feature: RT Description: RVT_N Location: 8833-9076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9121-9769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9121-9769 bp Feature: domain Description: GIIM Note: maturase Location: 9829-10054 bp Feature: domain Description: GIIM Note: maturase Location: 9829-10054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)