myRT

myRT report for GCA_003156275.1_20120600_S2D

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Seq: PMGL01000158.1 Acidimicrobiaceae bacterium isolate bog_703 73.20120600_S2D.5_contig_14994, whole genome shotgun sequence (4219 bp)
Overview 1 RT 1: 140-2982 bp Neighborhood of RT #1 [140, 4049] RVT-GII GIIM HTH_Hin_like HTH_Hin_like Feature: gene Location: 140-283 bp Feature: gene Location: 626-1879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1 502 bp Feature: domain Description: GIIM Note: maturase Location: 1583-1805 bp Feature: domain Description: GIIM Note: maturase Location: 1 583-1 805 bp Feature: gene Location: 1991-2731 bp Feature: gene Location: 2562-4049 bp Feature: domain Description: HTH_Hin_like Location: 2715-2802 bp Feature: domain Description: HTH_Hin_like Location: 271 5-2802 bp Feature: domain Description: HTH_Hin_like Location: 2865-2982 bp Feature: domain Description: HTH_Hin_like Location: 2865-2982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Hin_like (cd00569), RVT-GII, GIIM (pfam08388)

Seq: PMGL01000136.1 Acidimicrobiaceae bacterium isolate bog_703 73.20120600_S2D.5_contig_5664, whole genome shotgun sequence (25151 bp)
Overview 1 RT 1: 15125-21482 bp Neighborhood of RT #1 [15125, 21592] DegQ RVT-GII PRK08264 nicotinamidase_related Feature: gene Location: 15125-17299 bp Feature: domain Description: DegQ Location: 16388-17291 bp Feature: domain Description: DegQ Location: 16388-172 91 bp Feature: gene Location: 17393-17521 bp Feature: gene Location: 18346-18948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18607-18910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18607-18910 bp Feature: gene Location: 20279-20626 bp Feature: domain Description: PRK08264 Location: 20291-20576 bp Feature: domain Description: PRK082 64 Location: 2 02 91-2 0576 bp Feature: gene Location: 21032-21592 bp Feature: domain Description: nicotinamidase_related Location: 21065-21482 bp Feature: domain Description: nicotinamidase_related Location: 2 1065-2 1482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegQ (pfam08181), RVT-GII, PRK08264 (SDR family oxidoreductase), nicotinamidase_related (cd01014)

Seq: PMGL01000102.1 Acidimicrobiaceae bacterium isolate bog_703 73.20120600_S2D.5_contig_7151, whole genome shotgun sequence (25582 bp)
Overview 1 RT 1: 23293-25357 bp Neighborhood of RT #1 [23293, 25467] group_II_RT_mat RVT-GII group_II_RT_mat Feature: gene Location: 23293-23631 bp Feature: gene Location: 24092-24697 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 24368-24578 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 243 68-24578 bp Feature: gene Location: 24592-25467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24598-24964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24598-24964 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 24973-25357 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 24973 -253 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII