myRT

myRT report for GCA_003156675.1_20120600_P3M

Download annotations/find similar RTs

Seq: PMHM01000014.1 Solirubrobacterales bacterium isolate palsa_691 73.20120600_P3M.10_contig_22806, whole genome shotgun sequence (6004 bp)
Overview 1 RT 1: 3321-5901 bp Neighborhood of RT #1 [3321, 6002] KOG2647 RVT-GII RVT-GII GIIM Feature: gene Location: 3321-3593 bp Feature: gene Location: 3595-4842 bp Feature: domain Description: KOG2647 Location: 3844-4246 bp Feature: domain Description: KOG2647 Location: 3844-4246 bp Feature: gene Location: 4950-6002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5160-5436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 60-5436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5436-5601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5436-5601 bp Feature: domain Description: GIIM Note: maturase Location: 5694-5901 bp Feature: domain Description: GIIM Note: maturase Location: 5694-5901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2647 (KOG2647, Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase ), RVT-GII, GIIM (pfam08388)

Seq: PMHM01000131.1 Solirubrobacterales bacterium isolate palsa_691 73.20120600_P3M.10_contig_58, whole genome shotgun sequence (18815 bp)
Overview 1 RT 1: 16109-18813 bp Neighborhood of RT #1 [16109, 18813] DUF1016_N RVT-UG28 Feature: gene Location: 16109-16513 bp Feature: domain Description: DUF1016_N Location: 16196-16502 bp Feature: domain Description: DUF1016_N Location: 16196-16502 bp Feature: gene Location: 16998-17144 bp Feature: gene Location: 17231-18448 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 17237-17891 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 172 37-17891 bp Feature: gene Location: 18526-18813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1016_N (pfam17761), RVT-UG28