myRT

myRT report for GCA_003157215.1_20120600_E3D

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Seq: PMIY01000099.1 Acidimicrobiaceae bacterium isolate fen_684 73.20120600_E3D.15_contig_16965, whole genome shotgun sequence (4836 bp)
Overview 1 RT 1: 372-4690 bp Neighborhood of RT #1 [372, 4767] RVT-GII Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_4 INT_RitA_C_like RVT-GII Feature: gene Location: 372-1007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 9-906 bp Feature: gene Location: 1024-2028 bp Feature: domain Description: Phage_int_SAM_1 Location: 1069-1312 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 069-1 31 2 bp Feature: domain Description: INT_RitC_C_like Location: 1399-1948 bp Feature: domain Description: INT_RitC_C_like Location: 1 399-1 948 bp Feature: gene Location: 2018-2998 bp Feature: domain Description: INT_RitB_C_like Location: 2351-2933 bp Feature: domain Description: INT_RitB_C_like Location: 2351 -2933 bp Feature: gene Location: 2995-4245 bp Feature: domain Description: Phage_int_SAM_4 Location: 3358-3571 bp Feature: domain Description: Phage_int_SAM_4 Location: 3358-3571 bp Feature: domain Description: INT_RitA_C_like Location: 3673-4210 bp Feature: domain Description: INT_RitA_C_like Location: 3673-421 0 bp Feature: gene Location: 4396-4767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4399-4690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4399-4690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), RVT-GII, Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188)

Seq: PMIY01000138.1 Acidimicrobiaceae bacterium isolate fen_684 73.20120600_E3D.15_contig_21597, whole genome shotgun sequence (12815 bp)
Overview 1 RT 1: 7237-12387 bp Neighborhood of RT #1 [7237, 12812] SEST_like SpaA SpaA RVT-GII Feature: gene Location: 7237-10770 bp Feature: domain Description: SEST_like Location: 7864-8758 bp Feature: domain Description: SEST_like Location: 7864-8758 bp Feature: domain Description: SpaA Location: 9511-9571 bp Feature: domain Description: SpaA Location: 9511-9571 bp Feature: domain Description: SpaA Location: 9862-9922 bp Feature: domain Description: SpaA Location: 9862 -992 2 bp Feature: gene Location: 10721-11338 bp Feature: gene Location: 11478-12812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11862-12387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11862 -12 387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SEST_like (cd01823), SpaA (pfam17802)