myRT

myRT report for GCA_003157545.1_20120600_E2D

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Seq: PMJX01000073.1 Acidobacteriaceae bacterium isolate fen_301 73.20120600_E2D.28_contig_1062740, whole genome shotgun sequence (3165 bp)
Overview 1 RT 1: 101-1708 bp Neighborhood of RT #1 [101, 1782] RVT-GII Phage_int_SAM_1 INT_RitC_C_like Feature: gene Location: 101-379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3-329 bp Feature: gene Location: 424-738 bp Feature: gene Location: 850-1782 bp Feature: domain Description: Phage_int_SAM_1 Location: 856-1084 bp Feature: domain Description: Phage_int_SAM_1 Location: 856-1 084 bp Feature: domain Description: INT_RitC_C_like Location: 1174-1708 bp Feature: domain Description: INT_RitC_C_like Location: 1 1 74-1 708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182)

Seq: PMJX01000750.1 Acidobacteriaceae bacterium isolate fen_301 73.20120600_E2D.28_contig_198398, whole genome shotgun sequence (3956 bp)
Overview 1 RT 1: 196-2587 bp Neighborhood of RT #1 [196, 2682] RVT-GII GIIM HTH_21 Feature: gene Location: 196-1824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 613-1372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 613-1372 bp Feature: domain Description: GIIM Note: maturase Location: 1456-1663 bp Feature: domain Description: GIIM Note: maturase Location: 1456-1663 bp Feature: gene Location: 2093-2293 bp Feature: gene Location: 2320-2682 bp Feature: domain Description: HTH_21 Location: 2425-2587 bp Feature: domain Description: HTH_2 1 Location: 2 42 5-2 587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276)

Seq: PMJX01000110.1 Acidobacteriaceae bacterium isolate fen_301 73.20120600_E2D.28_contig_227579, whole genome shotgun sequence (4456 bp)
Overview 1 RT 1: 2-3582 bp Neighborhood of RT #1 [2, 3806] AcpA RVT_N RVT-GII GIIM Feature: gene Location: 2-1720 bp Feature: domain Description: AcpA Location: 275-410 bp Feature: domain Description: AcpA Location: 275-410 bp Feature: gene Location: 1855-2193 bp Feature: gene Location: 2295-3806 bp Feature: domain Description: RVT_N Location: 2361-2604 bp Feature: domain Description: RVT_N Location: 23 61-2604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2649-3294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2649-3 294 bp Feature: domain Description: GIIM Note: maturase Location: 3351-3582 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 51-3 582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcpA (cd16013), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PMJX01000467.1 Acidobacteriaceae bacterium isolate fen_301 73.20120600_E2D.28_contig_33193, whole genome shotgun sequence (30507 bp)
Overview 1 RT 1: 16329-20286 bp Neighborhood of RT #1 [16329, 20303] PRK13239 RVT-GII GIIM Peptidases_S53 Feature: gene Location: 16329-16727 bp Feature: domain Description: PRK13239 Location: 16518-16698 bp Feature: domain Description: PRK13239 Location: 16518-16698 bp Feature: gene Location: 16755-16952 bp Feature: gene Location: 17241-18626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17583-18201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17583-18201 bp Feature: domain Description: GIIM Note: maturase Location: 18255-18474 bp Feature: domain Description: GIIM Note: maturase Location: 18255-184 74 bp Feature: gene Location: 18687-18914 bp Feature: gene Location: 19080-20303 bp Feature: domain Description: Peptidases_S53 Location: 19311-20286 bp Feature: domain Description: Peptidases_S53 Location: 19311-20286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13239 (alkylmercury lyase MerB), RVT-GII, GIIM (pfam08388), Peptidases_S53 (cd04056)

Seq: PMJX01000783.1 Acidobacteriaceae bacterium isolate fen_301 73.20120600_E2D.28_contig_44596, whole genome shotgun sequence (10113 bp)
Overview 1 RT 1: 3-3710 bp Neighborhood of RT #1 [3, 3710] RVT-GII RVT-GII Feature: gene Location: 3-995 bp Feature: gene Location: 1105-1689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1108-1318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1108-1318 bp Feature: gene Location: 1692-2591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2106-2499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2106-2499 bp Feature: gene Location: 1995-3215 bp Feature: gene Location: 3258-3710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII