myRT

myRT report for GCA_003157835.1_20120600_E1D

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Seq: PMKT01000175.1 Ignavibacteriae bacterium isolate fen_1272 73.20120600_E1D.52_contig_676917, whole genome shotgun sequence (2754 bp)
Overview 1 RT 1: 938-2733 bp Neighborhood of RT #1 [938, 2753] RVT-Retrons Feature: gene Location: 938-1507 bp Feature: gene Location: 1514-1837 bp Feature: gene Location: 1968-2753 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2199-2733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 99-2733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: PMKT01000145.1 Ignavibacteriae bacterium isolate fen_1272 73.20120600_E1D.52_contig_959074, whole genome shotgun sequence (4081 bp)
Overview 1 RT 1: 86-3906 bp Neighborhood of RT #1 [86, 4079] Cas2_I_II_III CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III TIGR03986 Feature: gene Location: 86-346 bp Feature: domain Description: Cas2_I_II_III Location: 95-314 bp Feature: domain Description: Cas2 _I_II_III Location: 95-314 bp Feature: gene Location: 689-3274 bp Feature: domain Description: CRISPR_Cas6 Location: 1037-1373 bp Feature: domain Description: CRISPR_Cas6 Location: 1037-1373 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1613-2186 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1613-2 186 bp Feature: domain Description: Cas1_I-II-III Location: 2348-3236 bp Feature: domain Description: Cas1_I-II-III Location: 2 348-32 36 bp Feature: gene Location: 3366-4079 bp Feature: domain Description: TIGR03986 Location: 3534-3906 bp Feature: domain Description: TIGR03986 Location: 3534-3906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), TIGR03986 (CRISPR-associated protein)