myRT

myRT report for GCA_003158685.1_20120600_E1D

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Seq: PMKR01000164.1 Ignavibacteriae bacterium isolate fen_1273 73.20120600_E1D.63_contig_4782, whole genome shotgun sequence (80073 bp)
Overview 1 RT 1: 17894-27269 bp Neighborhood of RT #1 [17894, 27277] PRK01318 RVT-GII RVT-GII GIIM RVT-GII GIIM trmE PRK05192 Feature: gene Location: 17894-19687 bp Feature: domain Description: PRK01318 Location: 17897-19613 bp Feature: domain Description: PRK01 31 8 Location: 1 7897-1 961 3 bp Feature: gene Location: 19988-20254 bp Feature: gene Location: 20702-21337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20897-21326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20897-21 326 bp Feature: gene Location: 21526-21771 bp Feature: gene Location: 21920-23185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22136-22793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 36-22793 bp Feature: domain Description: GIIM Note: maturase Location: 22874-23096 bp Feature: domain Description: GIIM Note: maturase Location: 22874-23096 bp Feature: gene Location: 23271-23825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23277-23403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23277-23403 bp Feature: domain Description: GIIM Note: maturase Location: 23457-23670 bp Feature: domain Description: GIIM Note: maturase Location: 23457-23670 bp Feature: gene Location: 23984-25372 bp Feature: domain Description: trmE Location: 23999-25370 bp Feature: domain Description: trmE Location: 23999-25370 bp Feature: gene Location: 25394-27277 bp Feature: domain Description: PRK05192 Location: 25418-27269 bp Feature: domain Description: PRK051 92 Location: 2541 8-27269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01318 (membrane protein insertase; Provisional), RVT-GII, GIIM (pfam08388), trmE (PRK05291), PRK05192 (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG)