myRT

myRT report for GCA_003158955.1_20120500_P39

Download annotations/find similar RTs

Seq: PMLS01000096.1 Actinobacteria bacterium isolate palsa_665 73.20120500_P39.29_contig_44403, whole genome shotgun sequence (3971 bp)
Overview 1 RT 1: 558-3968 bp Neighborhood of RT #1 [558, 3968] Phage_int_SAM_1 INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII GIIM Feature: gene Location: 558-1544 bp Feature: domain Description: Phage_int_SAM_1 Location: 651-825 bp Feature: domain Description: Phage_int_SAM_1 Location: 651 -825 bp Feature: domain Description: INT_RitB_C_like Location: 891-1482 bp Feature: domain Description: INT_RitB_C_like Location: 891 -1 482 bp Feature: gene Location: 1541-2773 bp Feature: domain Description: Phage_int_SAM_1 Location: 1913-2111 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 91 3-21 1 1 bp Feature: domain Description: INT_RitA_C_like Location: 2201-2738 bp Feature: domain Description: INT_RitA_C_like Location: 2201 -2738 bp Feature: gene Location: 2932-3663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2935-3229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2935-3229 bp Feature: domain Description: GIIM Note: maturase Location: 3304-3517 bp Feature: domain Description: GIIM Note: maturase Location: 3304-351 7 bp Feature: gene Location: 3807-3968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII, GIIM (pfam08388), INT_RitB_C_like (cd00797)