myRT

myRT report for GCA_003159015.1_20120600_E1D

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Seq: PMLD01000042.1 Myxococcales bacterium isolate fen_1120 73.20120600_E1D.17_contig_11384, whole genome shotgun sequence (14432 bp)
Overview 1 RT 1: 1-4164 bp Neighborhood of RT #1 [1, 4187] RVT-GII FC-FACS_FadD_like TatD_DNAse Feature: gene Location: 1-1650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 598-1285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 598-1 285 bp Feature: gene Location: 1890-3359 bp Feature: domain Description: FC-FACS_FadD_like Location: 1950-3354 bp Feature: domain Description: FC-FACS_FadD_like Location: 1 950-3354 bp Feature: gene Location: 3393-4187 bp Feature: domain Description: TatD_DNAse Location: 3405-4164 bp Feature: domain Description: TatD_DNAse Location: 3405-41 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, FC-FACS_FadD_like (cd05936), TatD_DNAse (cd01310)

Seq: PMLD01000072.1 Myxococcales bacterium isolate fen_1120 73.20120600_E1D.17_contig_251173, whole genome shotgun sequence (5010 bp)
Overview 1 RT 1: 1921-4028 bp Neighborhood of RT #1 [1921, 4921] RVT-UG22 Feature: gene Location: 1921-2484 bp Feature: gene Location: 2571-3266 bp Feature: gene Location: 3263-4921 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 3485-4028 bp Feature: RT Description: RVT-UG2 2 Note: UG2 2 RT Location: 3485-402 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG22

Seq: PMLD01000493.1 Myxococcales bacterium isolate fen_1120 73.20120600_E1D.17_contig_93505, whole genome shotgun sequence (13646 bp)
Overview 1 RT 1: 2491-6627 bp Neighborhood of RT #1 [2491, 6650] RibD_C RVT-Retrons Vgb Vgb Vgb DUF1016_N YhcG_C Feature: gene Location: 2491-2829 bp Feature: gene Location: 2904-3452 bp Feature: domain Description: RibD_C Location: 2922-3426 bp Feature: domain Description: RibD_C Location: 2922-3 426 bp Feature: gene Location: 3702-4277 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3756-4023 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 756-4023 bp Feature: gene Location: 4734-5762 bp Feature: domain Description: Vgb Location: 4773-5181 bp Feature: domain Description: Vgb Location: 4773 -5181 bp Feature: domain Description: Vgb Location: 5190-5394 bp Feature: domain Description: Vgb Location: 5190-53 94 bp Feature: domain Description: Vgb Location: 5403-5760 bp Feature: domain Description: Vgb Location: 5403 -5760 bp Feature: gene Location: 5907-6650 bp Feature: domain Description: DUF1016_N Location: 5952-6360 bp Feature: domain Description: DUF1016_N Location: 5952-63 60 bp Feature: domain Description: YhcG_C Location: 6429-6627 bp Feature: domain Description: YhcG_C Location: 6429-6627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RibD_C (pfam01872), RVT-Retrons, Vgb (COG4257), DUF1016_N (pfam17761), YhcG_C