myRT

myRT report for GCA_003159065.1_20120600_E1D

Download annotations/find similar RTs

Seq: PMLL01000001.1 Myxococcales bacterium isolate fen_1117 73.20120600_E1D.121_contig_127322, whole genome shotgun sequence (3283 bp)
Overview 1 RT 1: 2-3281 bp Neighborhood of RT #1 [2, 3281] RVT-UNC Feature: gene Location: 2-2227 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 287-770 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 287-770 bp Feature: gene Location: 2427-3281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-UG17/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: PMLL01000739.1 Myxococcales bacterium isolate fen_1117 73.20120600_E1D.121_contig_141803, whole genome shotgun sequence (3240 bp)
Overview 1 RT 1: 2-2138 bp Neighborhood of RT #1 [2, 2470] RVT-GII PRK08317 PadR Feature: gene Location: 2-163 bp Feature: gene Location: 301-777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421-574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 1-574 bp Feature: gene Location: 972-1748 bp Feature: domain Description: PRK08317 Location: 1227-1584 bp Feature: domain Description: PRK08317 Location: 12 2 7-1584 bp Feature: gene Location: 1814-2470 bp Feature: domain Description: PadR Location: 1859-2138 bp Feature: domain Description: PadR Location: 1859-2 138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK08317 (hypothetical protein; Provisional), PadR (pfam03551)

Seq: PMLL01000827.1 Myxococcales bacterium isolate fen_1117 73.20120600_E1D.121_contig_62689, whole genome shotgun sequence (16959 bp)
Overview 1 RT 1: 4115-9052 bp Neighborhood of RT #1 [4115, 9052] RVT-Retrons Feature: gene Location: 4115-4645 bp Feature: gene Location: 4649-4996 bp Feature: gene Location: 5498-6103 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5504-5912 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5504-5912 bp Feature: gene Location: 6130-6288 bp Feature: gene Location: 6314-9052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons