myRT

myRT report for GCA_003159365.1_20120700_S3X

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Seq: PLOZ01000046.1 Acidobacteriaceae bacterium isolate bog_400 73.20120700_S3X.19_contig_14298, whole genome shotgun sequence (4502 bp)
Overview 1 RT 1: 418-4493 bp Neighborhood of RT #1 [418, 4501] PinE Zn_ribbon_recom excise DDE_Tnp_IS66_C RVT-GII Feature: gene Location: 418-2511 bp Feature: domain Description: PinE Location: 460-1072 bp Feature: domain Description: PinE Location: 460-1 072 bp Feature: domain Description: Zn_ribbon_recom Location: 1405-1576 bp Feature: domain Description: Zn_ribbon_recom Location: 1 405-1 576 bp Feature: domain Description: excise Location: 2269-2359 bp Feature: domain Description: excise Location: 2269-2359 bp Feature: gene Location: 3041-3241 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3086-3197 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3086-31 97 bp Feature: gene Location: 3359-4501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4097-4493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4097-4493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), excise (TIGR01764)

Seq: PLOZ01000347.1 Acidobacteriaceae bacterium isolate bog_400 73.20120700_S3X.19_contig_4833, whole genome shotgun sequence (12010 bp)
Overview 1 RT 1: 2821-8271 bp Neighborhood of RT #1 [2821, 8972] ilvH PRK05479 RVT-Retrons Beta-lactamase DUF3471 PMT_2 Feature: gene Location: 2821-3399 bp Feature: domain Description: ilvH Location: 2827-3304 bp Feature: domain Description: ilvH Location: 2 82 7-3304 bp Feature: gene Location: 3566-4504 bp Feature: domain Description: PRK05479 Location: 3626-4466 bp Feature: domain Description: PRK05479 Location: 362 6-4466 bp Feature: gene Location: 4696-6027 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5158-5800 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5158-5800 bp Feature: gene Location: 6236-7258 bp Feature: domain Description: Beta-lactamase Location: 6380-6908 bp Feature: domain Description: Beta-lactamase Location: 6380-6908 bp Feature: domain Description: DUF3471 Location: 6974-7223 bp Feature: domain Description: DUF3471 Location: 6974-72 2 3 bp Feature: gene Location: 7611-8972 bp Feature: domain Description: PMT_2 Location: 7860-8271 bp Feature: domain Description: PMT_2 Location: 7860-82 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ilvH (PRK11895), PRK05479 (ketol-acid reductoisomerase; Provisional), RVT-Retrons, Beta-lactamase (pfam00144), DUF3471 (pfam11954), PMT_2 (pfam13231)