myRT

myRT report for GCA_003159945.1_20120700_S2X

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Seq: PLQA01000060.1 Acidobacteriaceae bacterium isolate bog_389 73.20120700_S2X.5_contig_139, whole genome shotgun sequence (21885 bp)
Overview 1 RT 1: 3228-6786 bp Neighborhood of RT #1 [3228, 6788] RVT-UG7 PRK09812 MazE Feature: gene Location: 3228-3530 bp Feature: gene Location: 3559-4314 bp Feature: gene Location: 4470-6035 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4854-5280 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4854-5280 bp Feature: gene Location: 6247-6573 bp Feature: domain Description: PRK09812 Location: 6253-6571 bp Feature: domain Description: PRK0981 2 Location: 6253-6571 bp Feature: gene Location: 6570-6788 bp Feature: domain Description: MazE Location: 6579-6786 bp Feature: domain Description: MazE Location: 6579-6786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09812 (type II toxin-antitoxin system ChpB family toxin), MazE (COG2336)

Seq: PLQA01000051.1 Acidobacteriaceae bacterium isolate bog_389 73.20120700_S2X.5_contig_452, whole genome shotgun sequence (104866 bp)
Overview 1 RT 1: 64611-68881 bp Neighborhood of RT #1 [64611, 68949] RelB zf-UBP RVT-UG16 RpsA PRK00087 RpsA Feature: gene Location: 64611-64877 bp Feature: domain Description: RelB Location: 64623-64866 bp Feature: domain Description: RelB Location: 6462 3-64866 bp Feature: gene Location: 65381-65641 bp Feature: domain Description: zf-UBP Location: 65447-65636 bp Feature: domain Description: zf-UBP Location: 65447-65636 bp Feature: gene Location: 65673-67088 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 65955-66360 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 65955-66360 bp Feature: gene Location: 67230-68333 bp Feature: domain Description: RpsA Location: 67233-67728 bp Feature: domain Description: RpsA Location: 672 33-6772 8 bp Feature: domain Description: PRK00087 Location: 67866-68322 bp Feature: domain Description: PRK00087 Location: 67866-6832 2 bp Feature: gene Location: 68374-68949 bp Feature: domain Description: RpsA Location: 68440-68881 bp Feature: domain Description: RpsA Location: 68440-68881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB (pfam04221), zf-UBP (pfam02148), RVT-UG16, RpsA (COG0539), PRK00087 (bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1)