myRT

myRT report for GCA_003160345.1_20120700_S1X

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Seq: PLRC01000478.1 Bryobacterales bacterium isolate bog_380 73.20120700_S1X.25_contig_10258, whole genome shotgun sequence (5898 bp)
Overview 1 RT 1: 256-5552 bp Neighborhood of RT #1 [256, 5563] RVT-Retrons ADOP PIN_VapC4-5_FitB-like Feature: gene Location: 256-447 bp Feature: gene Location: 578-745 bp Feature: gene Location: 1016-2347 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1472-2117 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 472-21 1 7 bp Feature: gene Location: 2232-4841 bp Feature: domain Description: ADOP Location: 2397-4833 bp Feature: domain Description: ADOP Location: 2397-4833 bp Feature: gene Location: 5174-5563 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 5192-5552 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 51 92-5552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ADOP (TIGR03434), PIN_VapC4-5_FitB-like (cd18754)

Seq: PLRC01000183.1 Bryobacterales bacterium isolate bog_380 73.20120700_S1X.25_contig_2446, whole genome shotgun sequence (9882 bp)
Overview 1 RT 1: 5695-9572 bp Neighborhood of RT #1 [5695, 9610] Csm3_III-A Csm4_III-A Csm4_III-A RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 5695-6426 bp Feature: domain Description: Csm3_III-A Location: 5770-6409 bp Feature: domain Description: Csm3_III-A Location: 5770-6409 bp Feature: gene Location: 6423-7328 bp Feature: domain Description: Csm4_III-A Location: 6444-6612 bp Feature: domain Description: Csm4_III-A Location: 6444-6612 bp Feature: domain Description: Csm4_III-A Location: 6768-7299 bp Feature: domain Description: Csm4_III-A Location: 6768-72 99 bp Feature: gene Location: 7335-9338 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 7539-8133 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 7539-8133 bp Feature: domain Description: Cas1_I-II-III Location: 8352-9282 bp Feature: domain Description: Cas1_I-II-III Location: 8352 -92 82 bp Feature: gene Location: 9296-9610 bp Feature: domain Description: Cas2_I_II_III Location: 9344-9572 bp Feature: domain Description: Cas2 _I_II_III Location: 9344-9572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csm3_III-A (cd09684), Csm4_III-A (cl23831), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)