myRT

myRT report for GCA_003160535.1_20120700_S2D

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Seq: PLQT01000226.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1459 73.20120700_S2D.12_contig_15966, whole genome shotgun sequence (5169 bp)
Overview 1 RT 1: 2857-4801 bp Neighborhood of RT #1 [2857, 5037] RVT_N RVT-GII GIIM Feature: gene Location: 2857-3141 bp Feature: gene Location: 3235-3483 bp Feature: gene Location: 3529-5037 bp Feature: RT Description: RVT_N Location: 3580-3823 bp Feature: RT Description: RVT_N Location: 3580-3823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3868-4513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3868-451 3 bp Feature: domain Description: GIIM Note: maturase Location: 4570-4801 bp Feature: domain Description: GIIM Note: maturase Location: 4570-4801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PLQT01000045.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1459 73.20120700_S2D.12_contig_3116, whole genome shotgun sequence (7127 bp)
Overview 1 RT 1: 4744-6998 bp Neighborhood of RT #1 [4744, 7126] xerC RVT-GII Feature: gene Location: 4744-5829 bp Feature: domain Description: xerC Location: 4849-5776 bp Feature: domain Description: xerC Location: 4849-5776 bp Feature: gene Location: 5903-6784 bp Feature: gene Location: 6065-7126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6815-6998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6815-6998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), RVT-GII

Seq: PLQT01000224.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1459 73.20120700_S2D.12_contig_4713, whole genome shotgun sequence (4844 bp)
Overview 1 RT 1: 282-2790 bp Neighborhood of RT #1 [282, 2840] RVT-GII GIIM KdpC Feature: gene Location: 282-413 bp Feature: gene Location: 680-1564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 686-1040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 686-1040 bp Feature: domain Description: GIIM Note: maturase Location: 1100-1328 bp Feature: domain Description: GIIM Note: maturase Location: 1100-13 28 bp Feature: gene Location: 1600-1770 bp Feature: gene Location: 2217-2840 bp Feature: domain Description: KdpC Location: 2235-2790 bp Feature: domain Description: KdpC Location: 223 5-2790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KdpC (pfam02669), RVT-GII, GIIM (pfam08388)

Seq: PLQT01000200.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1459 73.20120700_S2D.12_contig_572, whole genome shotgun sequence (4618 bp)
Overview 1 RT 1: 2-1635 bp Neighborhood of RT #1 [2, 1635] RVT_N RVT-GII Feature: gene Location: 2-850 bp Feature: RT Description: RVT_N Location: 53-296 bp Feature: RT Description: RVT_N Location: 53-296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341-851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 1-851 bp Feature: gene Location: 935-1207 bp Feature: gene Location: 1450-1635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII