myRT

myRT report for GCA_003161335.1_20110600_S1D

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Seq: PMPJ01000418.1 Verrucomicrobiales bacterium isolate bog_1373 73.20110600_S1D.32_contig_21145, whole genome shotgun sequence (3075 bp)
Overview 1 RT 1: 2-3014 bp Neighborhood of RT #1 [2, 3073] rve_3 PinE RVT-GII GIIM Feature: gene Location: 2-1003 bp Feature: domain Description: rve_3 Location: 725-899 bp Feature: domain Description: rve_3 Location: 725-899 bp Feature: gene Location: 1159-1833 bp Feature: domain Description: PinE Location: 1210-1786 bp Feature: domain Description: PinE Location: 1 21 0-1 786 bp Feature: gene Location: 2339-3073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2345-2738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2345-2738 bp Feature: domain Description: GIIM Note: maturase Location: 2783-3014 bp Feature: domain Description: GIIM Note: maturase Location: 2783-301 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), PinE (COG1961), RVT-GII, GIIM (pfam08388)

Seq: PMPJ01000590.1 Verrucomicrobiales bacterium isolate bog_1373 73.20110600_S1D.32_contig_27495, whole genome shotgun sequence (10644 bp)
Overview 1 RT 1: 2-2270 bp Neighborhood of RT #1 [2, 2270] RVT-GII RVT-GII Feature: gene Location: 2-745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401-539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401-539 bp Feature: gene Location: 742-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1015 bp Feature: gene Location: 1198-1383 bp Feature: gene Location: 1545-2270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII