myRT

myRT report for GCA_003161455.1_20110600_P3S

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Seq: PMOT01000075.1 Acidobacteriaceae bacterium isolate palsa_92 73.20110600_P3S.2_contig_1120, whole genome shotgun sequence (54912 bp)
Overview 1 RT 1: 27556-32365 bp Neighborhood of RT #1 [27556, 32365] DmpA recQ recQ RVT-Retrons RVT-Retrons Feature: gene Location: 27556-28731 bp Feature: domain Description: DmpA Location: 27664-28678 bp Feature: domain Description: DmpA Location: 27664-28678 bp Feature: gene Location: 29103-30638 bp Feature: domain Description: recQ Location: 29136-30312 bp Feature: domain Description: recQ Location: 291 36-3031 2 bp Feature: domain Description: recQ Location: 30360-30609 bp Feature: domain Description: recQ Location: 30360-30609 bp Feature: gene Location: 30677-31462 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30776-30968 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30776-30968 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30971-31226 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30971 -31 226 bp Feature: gene Location: 31459-32163 bp Feature: gene Location: 32237-32365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DmpA (COG3191), recQ (TIGR01389), RVT-Retrons

Seq: PMOT01000057.1 Acidobacteriaceae bacterium isolate palsa_92 73.20110600_P3S.2_contig_1817, whole genome shotgun sequence (97540 bp)
Overview 1 RT 1: 90081-94010 bp Neighborhood of RT #1 [90081, 94010] Cytidylate_kin2 SRAP RVT_N RVT-GII GIIM SRAP Feature: gene Location: 90081-90710 bp Feature: domain Description: Cytidylate_kin2 Location: 90093-90636 bp Feature: domain Description: Cytidylate_kin2 Location: 90093-90636 bp Feature: gene Location: 90760-91212 bp Feature: domain Description: SRAP Location: 90841-91177 bp Feature: domain Description: SRAP Location: 90841-91177 bp Feature: gene Location: 91241-92716 bp Feature: RT Description: RVT_N Location: 91286-91523 bp Feature: RT Description: RVT_N Location: 912 86-9152 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91574-92222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91574-92 2 2 2 bp Feature: domain Description: GIIM Note: maturase Location: 92282-92510 bp Feature: domain Description: GIIM Note: maturase Location: 92 2 82 -92 510 bp Feature: gene Location: 93211-93465 bp Feature: domain Description: SRAP Location: 93214-93382 bp Feature: domain Description: SRAP Location: 932 14-93382 bp Feature: gene Location: 93777-94010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cytidylate_kin2 (pfam13189), SRAP (pfam02586), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)