myRT

myRT report for GCA_003161715.1_20110600_E3D

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Seq: PMNW01000203.1 Acidimicrobiaceae bacterium isolate fen_455 73.20110600_E3D.7_contig_1396, whole genome shotgun sequence (2531 bp)
Overview 1 RT 1: 680-1958 bp Neighborhood of RT #1 [680, 2392] RVT_N RVT-GII GIIM Feature: gene Location: 680-2392 bp Feature: RT Description: RVT_N Location: 719-959 bp Feature: RT Description: RVT_N Location: 71 9-959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1016-1673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 6-1 673 bp Feature: domain Description: GIIM Note: maturase Location: 1727-1958 bp Feature: domain Description: GIIM Note: maturase Location: 1 727-1 958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PMNW01000011.1 Acidimicrobiaceae bacterium isolate fen_455 73.20110600_E3D.7_contig_470, whole genome shotgun sequence (5311 bp)
Overview 1 RT 1: 2-5120 bp Neighborhood of RT #1 [2, 5203] DDE_Tnp_1_4 RVT-GII Phage_int_SAM_4 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII Feature: gene Location: 2-241 bp Feature: domain Description: DDE_Tnp_1_4 Location: 77-242 bp Feature: domain Description: DDE_Tnp_1_4 Location: 77-2 42 bp Feature: gene Location: 560-931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 563-854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 563-854 bp Feature: gene Location: 1078-2328 bp Feature: domain Description: Phage_int_SAM_4 Location: 1441-1654 bp Feature: domain Description: Phage_int_SAM_4 Location: 1441-1654 bp Feature: domain Description: INT_RitA_C_like Location: 1756-2293 bp Feature: domain Description: INT_RitA_C_like Location: 1756-2 2 93 bp Feature: gene Location: 2325-3305 bp Feature: domain Description: INT_RitB_C_like Location: 2658-3240 bp Feature: domain Description: INT_RitB_C_like Location: 2 658-32 40 bp Feature: gene Location: 3295-4299 bp Feature: domain Description: Phage_int_SAM_1 Location: 3340-3583 bp Feature: domain Description: Phage_int_SAM_1 Location: 3340-3583 bp Feature: domain Description: INT_RitC_C_like Location: 3670-4219 bp Feature: domain Description: INT_RitC_C_like Location: 3670-42 19 bp Feature: gene Location: 4316-5203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4724-5120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472 4-512 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182)