myRT

myRT report for GCA_003162425.1_20110600_P1M

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Seq: PMOK01000250.1 Bryobacterales bacterium isolate palsa_89 73.20110600_P1M.2_contig_24780, whole genome shotgun sequence (25964 bp)
Overview 1 RT 1: 172-2644 bp Neighborhood of RT #1 [172, 2644] RVT-GII RVT-GII GIIM Feature: gene Location: 172-837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457-835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457-835 bp Feature: gene Location: 856-1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862-1 096 bp Feature: domain Description: GIIM Note: maturase Location: 1168-1387 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 68-1 387 bp Feature: gene Location: 1683-2135 bp Feature: gene Location: 2468-2644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMOK01000039.1 Bryobacterales bacterium isolate palsa_89 73.20110600_P1M.2_contig_329, whole genome shotgun sequence (76951 bp)
Overview 1 RT 1: 63941-68311 bp Neighborhood of RT #1 [63941, 68340] PRK13014 GAF RVT-Retrons PRK02627 PRK11207 Feature: gene Location: 63941-64561 bp Feature: domain Description: PRK13014 Location: 64043-64550 bp Feature: domain Description: PRK13014 Location: 64043-64550 bp Feature: gene Location: 64564-65028 bp Feature: domain Description: GAF Location: 64573-65020 bp Feature: domain Description: GAF Location: 64573-6502 0 bp Feature: gene Location: 65273-66577 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65729-66347 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6572 9-66347 bp Feature: gene Location: 66599-67840 bp Feature: domain Description: PRK02627 Location: 66647-67814 bp Feature: domain Description: PRK02 62 7 Location: 66647-67814 bp Feature: gene Location: 67837-68340 bp Feature: domain Description: PRK11207 Location: 67900-68311 bp Feature: domain Description: PRK112 07 Location: 67900-68311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13014 (methionine sulfoxide reductase A; Provisional), GAF (smart00065), RVT-Retrons, PRK02627 (acetylornithine aminotransferase; Provisional), PRK11207 (tellurite resistance methyltransferase TehB)

Seq: PMOK01000002.1 Bryobacterales bacterium isolate palsa_89 73.20110600_P1M.2_contig_956, whole genome shotgun sequence (18576 bp)
Overview 1 RT 1: 5826-12539 bp Neighborhood of RT #1 [5826, 12539] Phage_int_SAM_1 Phage_int_SAM_1 Phage_int_SAM_1 INT_RitA_C_like PRK08763 RVT-GII GIIM Feature: gene Location: 5826-7820 bp Feature: domain Description: Phage_int_SAM_1 Location: 6033-6258 bp Feature: domain Description: Phage_int_SAM_1 Location: 603 3 -6258 bp Feature: domain Description: Phage_int_SAM_1 Location: 6309-6567 bp Feature: domain Description: Phage_int_SAM_1 Location: 63 09-6567 bp Feature: domain Description: Phage_int_SAM_1 Location: 6936-7176 bp Feature: domain Description: Phage_int_SAM_1 Location: 693 6-7176 bp Feature: domain Description: INT_RitA_C_like Location: 7260-7794 bp Feature: domain Description: INT_RitA_C_like Location: 7260-7794 bp Feature: gene Location: 8170-8373 bp Feature: domain Description: PRK08763 Location: 8176-8371 bp Feature: domain Description: PRK08763 Location: 8176-83 71 bp Feature: gene Location: 8932-10269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9235-9868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 923 5-9868 bp Feature: domain Description: GIIM Note: maturase Location: 9940-10162 bp Feature: domain Description: GIIM Note: maturase Location: 9940-10162 bp Feature: gene Location: 10599-10904 bp Feature: gene Location: 11037-12539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), PRK08763 (single-stranded DNA-binding protein; Provisional), RVT-GII, GIIM (pfam08388)