myRT

myRT report for GCA_003162735.1_20100900_E1D

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Seq: PMME01000761.1 Myxococcales bacterium isolate fen_1082 73.20100900_E1D.13_contig_26939, whole genome shotgun sequence (4107 bp)
Overview 1 RT 1: 965-3919 bp Neighborhood of RT #1 [965, 3919] RVT-GII Feature: gene Location: 965-1408 bp Feature: gene Location: 1422-2156 bp Feature: gene Location: 2230-3636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2542-3232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2542-3232 bp Feature: gene Location: 3620-3919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PMME01000652.1 Myxococcales bacterium isolate fen_1082 73.20100900_E1D.13_contig_32503, whole genome shotgun sequence (7548 bp)
Overview 1 RT 1: 274-3599 bp Neighborhood of RT #1 [274, 3658] DUF2442 DUF1566 RVT-DGRs Avd_like Feature: gene Location: 274-582 bp Feature: domain Description: DUF2442 Location: 331-508 bp Feature: domain Description: DUF2 442 Location: 331-508 bp Feature: gene Location: 920-1384 bp Feature: domain Description: DUF1566 Location: 1043-1382 bp Feature: domain Description: DUF1566 Location: 1043-1382 bp Feature: gene Location: 1381-2991 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1582-2311 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1582 -2 311 bp Feature: gene Location: 3033-3242 bp Feature: gene Location: 3260-3658 bp Feature: domain Description: Avd_like Location: 3290-3599 bp Feature: domain Description: Avd_like Location: 32 90-3599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2442 (pfam10387), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)

Seq: PMME01000119.1 Myxococcales bacterium isolate fen_1082 73.20100900_E1D.13_contig_34440, whole genome shotgun sequence (2912 bp)
Overview 1 RT 1: 74-2519 bp Neighborhood of RT #1 [74, 2557] RVT-GII HigB-like_toxin VapI Feature: gene Location: 74-1801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 734-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 4-1424 bp Feature: gene Location: 1945-2235 bp Feature: domain Description: HigB-like_toxin Location: 1960-2233 bp Feature: domain Description: HigB-like_toxin Location: 1960-223 3 bp Feature: gene Location: 2255-2557 bp Feature: domain Description: VapI Location: 2261-2519 bp Feature: domain Description: VapI Location: 2261-2519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HigB-like_toxin (pfam05015), VapI (COG3093)

Seq: PMME01000036.1 Myxococcales bacterium isolate fen_1082 73.20100900_E1D.13_contig_57933, whole genome shotgun sequence (3846 bp)
Overview 1 RT 1: 2-3787 bp Neighborhood of RT #1 [2, 3843] Pgu1 RVT-GII GIIM PilU Feature: gene Location: 2-208 bp Feature: gene Location: 250-1302 bp Feature: domain Description: Pgu1 Location: 292-1012 bp Feature: domain Description: Pgu1 Location: 292-1012 bp Feature: gene Location: 1777-3162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2119-2737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2119-2737 bp Feature: domain Description: GIIM Note: maturase Location: 2791-3010 bp Feature: domain Description: GIIM Note: maturase Location: 2791-3010 bp Feature: gene Location: 3223-3450 bp Feature: gene Location: 3667-3843 bp Feature: domain Description: PilU Location: 3670-3787 bp Feature: domain Description: PilU Location: 3670-3787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pgu1 (COG5434), RVT-GII, GIIM (pfam08388), PilU (COG5008)

Seq: PMME01000732.1 Myxococcales bacterium isolate fen_1082 73.20100900_E1D.13_contig_74253, whole genome shotgun sequence (3328 bp)
Overview 1 RT 1: 3-3053 bp Neighborhood of RT #1 [3, 3283] RVT-GII GIIM RVT-GII Feature: gene Location: 3-686 bp Feature: gene Location: 481-1854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 817-1432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 817-1432 bp Feature: domain Description: GIIM Note: maturase Location: 1486-1690 bp Feature: domain Description: GIIM Note: maturase Location: 1486-1690 bp Feature: gene Location: 2666-3283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2672-3053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2672-305 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMME01000278.1 Myxococcales bacterium isolate fen_1082 73.20100900_E1D.13_contig_8342, whole genome shotgun sequence (2527 bp)
Overview 1 RT 1: 2-2526 bp Neighborhood of RT #1 [2, 2526] Peptidases_S8_subtilisin_Vpr-like RVT-GII GIIM Feature: gene Location: 2-379 bp Feature: domain Description: Peptidases_S8_subtilisin_Vpr-like Location: 56-317 bp Feature: domain Description: Peptidases_S8_subtilisin_Vpr-like Location: 56 -317 bp Feature: gene Location: 711-2084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035-1647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035-16 47 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1911 bp Feature: domain Description: GIIM Note: maturase Location: 16 92-1911 bp Feature: gene Location: 2380-2526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_subtilisin_Vpr-like (cd07474), RVT-GII, GIIM (pfam08388)