myRT

myRT report for GCA_003162955.1_20120800_S3M

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Seq: PLUX01000280.1 Acidimicrobiaceae bacterium isolate bog_830 73.20120800_S3M.6_contig_2511, whole genome shotgun sequence (27442 bp)
Overview 1 RT 1: 273-11700 bp Neighborhood of RT #1 [273, 11990] COG5421 RVT-GII GIIM PIN_MtVapC4-C5-like Phd nicotinamidase_related PRK08264 RVT-GII degP_htrA_DO Feature: gene Location: 273-2036 bp Feature: domain Description: COG5421 Location: 735-1836 bp Feature: domain Description: COG5421 Location: 735-1 836 bp Feature: gene Location: 2062-3306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2272-2932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2272-2932 bp Feature: domain Description: GIIM Note: maturase Location: 3022-3241 bp Feature: domain Description: GIIM Note: maturase Location: 3022-3241 bp Feature: gene Location: 4619-5005 bp Feature: domain Description: PIN_MtVapC4-C5-like Location: 4634-5000 bp Feature: domain Description: PIN_MtVapC4-C5-like Location: 4634-5000 bp Feature: gene Location: 5002-5268 bp Feature: domain Description: Phd Location: 5026-5248 bp Feature: domain Description: Phd Location: 5026-5248 bp Feature: gene Location: 5499-6059 bp Feature: domain Description: nicotinamidase_related Location: 5532-5949 bp Feature: domain Description: nicotinamidase_related Location: 5532-5949 bp Feature: gene Location: 6465-6812 bp Feature: domain Description: PRK08264 Location: 6477-6762 bp Feature: domain Description: PRK08264 Location: 6477-6762 bp Feature: gene Location: 8143-8820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8404-8785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8404-8785 bp Feature: gene Location: 9545-9742 bp Feature: gene Location: 9867-11990 bp Feature: domain Description: degP_htrA_DO Location: 11130-11700 bp Feature: domain Description: degP_htrA_DO Location: 1 1 1 30-1 1 700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG5421 (Transposase ), Phd (COG4118), nicotinamidase_related (cd01014), PRK08264 (SDR family oxidoreductase), degP_htrA_DO (TIGR02037)

Seq: PLUX01000115.1 Acidimicrobiaceae bacterium isolate bog_830 73.20120800_S3M.6_contig_5550, whole genome shotgun sequence (29959 bp)
Overview 1 RT 1: 25550-28937 bp Neighborhood of RT #1 [25550, 29293] His_Phos_1 IS5 IS5 RVT-GII Feature: gene Location: 25550-26308 bp Feature: domain Description: His_Phos_1 Location: 25610-26162 bp Feature: domain Description: His_Phos_1 Location: 2 5610-2 6162 bp Feature: gene Location: 26495-27982 bp Feature: domain Description: IS5 Location: 26624-27053 bp Feature: domain Description: IS5 Location: 2 662 4-2 7053 bp Feature: domain Description: IS5 Location: 27368-27869 bp Feature: domain Description: IS5 Location: 2 7368-2 7869 bp Feature: gene Location: 28082-29293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28277-28937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 77-2 8937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT His_Phos_1 (pfam00300), IS5 (COG3039), RVT-GII