myRT

myRT report for GCA_003163615.1_20120800_S2M

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Seq: PLVV01000271.1 Acidobacteriaceae bacterium isolate bog_433 73.20120800_S2M.12_contig_2652, whole genome shotgun sequence (21846 bp)
Overview 1 RT 1: 323-4447 bp Neighborhood of RT #1 [323, 4539] AAA RVT-GII LacZ DUF4982 Glyco_hydro2_C5 Feature: gene Location: 323-1258 bp Feature: domain Description: AAA Location: 347-626 bp Feature: domain Description: AAA Location: 347-626 bp Feature: gene Location: 1161-1508 bp Feature: gene Location: 1549-1725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1582-1717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 582-1 71 7 bp Feature: gene Location: 1836-2216 bp Feature: gene Location: 1996-4539 bp Feature: domain Description: LacZ Location: 2287-3811 bp Feature: domain Description: LacZ Location: 2287-381 1 bp Feature: domain Description: DUF4982 Location: 3952-4126 bp Feature: domain Description: DUF4982 Location: 3952-41 26 bp Feature: domain Description: Glyco_hydro2_C5 Location: 4162-4447 bp Feature: domain Description: Glyco_hydro2_C5 Location: 41 62-4447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LacZ (COG3250), DUF4982 (pfam16355), Glyco_hydro2_C5 (pfam18565), AAA (TIGR00769)

Seq: PLVV01000121.1 Acidobacteriaceae bacterium isolate bog_433 73.20120800_S2M.12_contig_6699, whole genome shotgun sequence (6245 bp)
Overview 1 RT 1: 3-5755 bp Neighborhood of RT #1 [3, 5755] RVT-GII Cas1_I-II-III Feature: gene Location: 3-128 bp Feature: gene Location: 217-3729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1567-2185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1567-2 185 bp Feature: domain Description: Cas1_I-II-III Location: 2731-3685 bp Feature: domain Description: Cas1_I-II-III Location: 2 731-3685 bp Feature: gene Location: 3713-4204 bp Feature: gene Location: 4169-5755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Cas1_I-II-III (cl00656)