myRT

myRT report for GCA_003164255.1_20120700_S1D

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Seq: PLST01000022.1 Acidobacteriaceae bacterium isolate bog_368 73.20120700_S1D.31_contig_120695, whole genome shotgun sequence (4171 bp)
Overview 1 RT 1: 3-4168 bp Neighborhood of RT #1 [3, 4168] RVT-GII Cas1_I-II-III Feature: gene Location: 3-401 bp Feature: gene Location: 385-3897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1735-2353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 735-2353 bp Feature: domain Description: Cas1_I-II-III Location: 2899-3853 bp Feature: domain Description: Cas1 _I-II-III Location: 2899-3853 bp Feature: gene Location: 3986-4168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Cas1_I-II-III (cl00656)

Seq: PLST01000434.1 Acidobacteriaceae bacterium isolate bog_368 73.20120700_S1D.31_contig_35708, whole genome shotgun sequence (24316 bp)
Overview 1 RT 1: 951-5569 bp Neighborhood of RT #1 [951, 5583] RVT-GII GIIM cztS_silS_copS cztR_silR_copR Feature: gene Location: 951-1172 bp Feature: gene Location: 1303-1626 bp Feature: gene Location: 1932-3218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2166-2823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 166-2 82 3 bp Feature: domain Description: GIIM Note: maturase Location: 2904-3123 bp Feature: domain Description: GIIM Note: maturase Location: 2 904-312 3 bp Feature: gene Location: 3480-4931 bp Feature: domain Description: cztS_silS_copS Location: 3531-4914 bp Feature: domain Description: cztS_silS_copS Location: 3531-4914 bp Feature: gene Location: 4909-5583 bp Feature: domain Description: cztR_silR_copR Location: 4918-5569 bp Feature: domain Description: cztR_silR_copR Location: 4918-5569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), cztS_silS_copS (TIGR01386), cztR_silR_copR (TIGR01387)