myRT

myRT report for GCA_003164305.1_20120700_S1D

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Seq: PLSZ01000375.1 Acetobacteraceae bacterium isolate bog_934 73.20120700_S1D.260_contig_332172, whole genome shotgun sequence (15154 bp)
Overview 1 RT 1: 11684-14907 bp Neighborhood of RT #1 [11684, 14981] FhlA COG5001 RVT-GII Feature: gene Location: 11684-11917 bp Feature: gene Location: 11949-14273 bp Feature: domain Description: FhlA Location: 12138-12381 bp Feature: domain Description: FhlA Location: 1 21 38-1 2381 bp Feature: domain Description: COG5001 Location: 12873-14157 bp Feature: domain Description: COG5001 Location: 1 2873-1 41 57 bp Feature: gene Location: 14628-14981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14691-14907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4691 -1 4907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FhlA (COG3604), COG5001 (Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain ), RVT-GII

Seq: PLSZ01000282.1 Acetobacteraceae bacterium isolate bog_934 73.20120700_S1D.260_contig_441840, whole genome shotgun sequence (5900 bp)
Overview 1 RT 1: 669-3340 bp Neighborhood of RT #1 [669, 3348] RVT-Retrons PIN_VapC-like RelB Feature: gene Location: 669-2018 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1116-1776 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1116-1776 bp Feature: gene Location: 2430-2828 bp Feature: domain Description: PIN_VapC-like Location: 2439-2805 bp Feature: domain Description: PIN_VapC-like Location: 2 439-2 805 bp Feature: gene Location: 3091-3348 bp Feature: domain Description: RelB Location: 3094-3340 bp Feature: domain Description: RelB Location: 3094-3340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PIN_VapC-like (cd18715), RelB (pfam04221)