myRT

myRT report for GCA_003164475.1_20120700_S1D

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Seq: PLTL01000090.1 Candidate division AD3 bacterium isolate bog_877 73.20120700_S1D.200_contig_6983, whole genome shotgun sequence (6377 bp)
Overview 1 RT 1: 3-6252 bp Neighborhood of RT #1 [3, 6269] ABC_MutS_homologs RVT-GII GIIM COG3464 FeS_nifS Feature: gene Location: 3-425 bp Feature: gene Location: 451-2040 bp Feature: domain Description: ABC_MutS_homologs Location: 1447-2005 bp Feature: domain Description: ABC_MutS_homologs Location: 1 447-2005 bp Feature: gene Location: 2988-4427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3309-3993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3309-3993 bp Feature: domain Description: GIIM Note: maturase Location: 4068-4296 bp Feature: domain Description: GIIM Note: maturase Location: 4068-4296 bp Feature: gene Location: 4944-5987 bp Feature: domain Description: COG3464 Location: 4986-5907 bp Feature: domain Description: COG3464 Location: 4986-5907 bp Feature: gene Location: 6126-6269 bp Feature: domain Description: FeS_nifS Location: 6156-6252 bp Feature: domain Description: FeS_nifS Location: 61 56-6252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_MutS_homologs (cd03243), RVT-GII, GIIM (pfam08388), COG3464 (Transposase ), FeS_nifS (TIGR03402)

Seq: PLTL01000299.1 Candidate division AD3 bacterium isolate bog_877 73.20120700_S1D.200_contig_805234, whole genome shotgun sequence (3487 bp)
Overview 1 RT 1: 3-3060 bp Neighborhood of RT #1 [3, 3060] RVT-UG23 Feature: gene Location: 3-170 bp Feature: gene Location: 251-1321 bp Feature: gene Location: 1624-2886 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 1636-2194 bp Feature: RT Description: RVT-UG2 3 Note: UG2 3 RT Location: 1636-2 194 bp Feature: gene Location: 2917-3060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG23