myRT

myRT report for GCA_003164925.1_20120700_S1D

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Seq: PLRV01000038.1 Caulobacteraceae bacterium isolate bog_938 73.20120700_S1D.89_contig_102031, whole genome shotgun sequence (19490 bp)
Overview 1 RT 1: 1866-7385 bp Neighborhood of RT #1 [1866, 7591] PRK00024 RVT-GII DUF1612 HTH_13 ParAB_family Feature: gene Location: 1866-2291 bp Feature: gene Location: 2284-3012 bp Feature: domain Description: PRK00024 Location: 2371-3007 bp Feature: domain Description: PRK00024 Location: 2371 -3007 bp Feature: gene Location: 3469-4944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3877-4567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3877-4567 bp Feature: gene Location: 5204-6145 bp Feature: domain Description: DUF1612 Location: 5648-5954 bp Feature: domain Description: DUF1 61 2 Location: 5648-5954 bp Feature: domain Description: HTH_13 Location: 5984-6137 bp Feature: domain Description: HTH_1 3 Location: 5984-61 37 bp Feature: gene Location: 6812-7591 bp Feature: domain Description: ParAB_family Location: 6824-7385 bp Feature: domain Description: ParAB_family Location: 6824-7385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), RVT-GII, DUF1612 (pfam07756), HTH_13 (pfam11972), ParAB_family (cd02042)

Seq: PLRV01000028.1 Caulobacteraceae bacterium isolate bog_938 73.20120700_S1D.89_contig_147359, whole genome shotgun sequence (9724 bp)
Overview 1 RT 1: 3657-9538 bp Neighborhood of RT #1 [3657, 9552] PRK00024 MPTase-PolyVal RVT-GII Intron_maturas2 HNHc DDE_Tnp_1_4 DDE_Tnp_1_4 DUF1738 Feature: gene Location: 3657-4529 bp Feature: domain Description: PRK00024 Location: 3891-4524 bp Feature: domain Description: PRK0002 4 Location: 3891-452 4 bp Feature: gene Location: 4563-5024 bp Feature: domain Description: MPTase-PolyVal Location: 4584-4950 bp Feature: domain Description: MPTase-PolyVal Location: 4584-4950 bp Feature: gene Location: 5105-7021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5372-6209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5372 -62 09 bp Feature: domain Description: Intron_maturas2 Location: 6290-6578 bp Feature: domain Description: Intron_maturas2 Location: 62 90-6578 bp Feature: domain Description: HNHc Note: nucleases Location: 6746-6902 bp Feature: domain Description: HNHc Note: nucleases Location: 6746-6902 bp Feature: gene Location: 7146-8399 bp Feature: domain Description: DDE_Tnp_1_4 Location: 7185-8082 bp Feature: domain Description: DDE_Tnp_1_4 Location: 7185-8082 bp Feature: domain Description: DDE_Tnp_1_4 Location: 8088-8391 bp Feature: domain Description: DDE_Tnp_1_4 Location: 8088-8391 bp Feature: gene Location: 9184-9552 bp Feature: domain Description: DUF1738 Location: 9208-9538 bp Feature: domain Description: DUF1738 Location: 92 08-9538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), MPTase-PolyVal (pfam18818), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DDE_Tnp_1_4 (pfam13701), DUF1738 (pfam08401)