myRT

myRT report for GCA_003164965.1_20120700_S1D

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Seq: PLRY01000018.1 Gammaproteobacteria bacterium isolate bog_1224 73.20120700_S1D.81_contig_197307, whole genome shotgun sequence (4206 bp)
Overview 1 RT 1: 2845-4127 bp Neighborhood of RT #1 [2845, 4204] RVT-GII Feature: gene Location: 2845-3234 bp Feature: gene Location: 3274-3426 bp Feature: gene Location: 3596-4204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3611-4127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361 1 -41 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PLRY01000023.1 Gammaproteobacteria bacterium isolate bog_1224 73.20120700_S1D.81_contig_34317, whole genome shotgun sequence (62084 bp)
Overview 1 RT 1: 6772-11457 bp Neighborhood of RT #1 [6772, 11567] TolC RVT-GII Acetyltransf_1 PRK03606 Feature: gene Location: 6772-8085 bp Feature: domain Description: TolC Location: 6781-8083 bp Feature: domain Description: TolC Location: 6781-8083 bp Feature: gene Location: 8256-8462 bp Feature: gene Location: 9513-10157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9516-9873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9516-9873 bp Feature: gene Location: 10345-10740 bp Feature: domain Description: Acetyltransf_1 Location: 10417-10699 bp Feature: domain Description: Acetyltransf_1 Location: 10417-10699 bp Feature: gene Location: 10872-11567 bp Feature: domain Description: PRK03606 Location: 11247-11457 bp Feature: domain Description: PRK03606 Location: 112 47-11457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), PRK03606 (ureidoglycolate lyase), TolC (COG1538), RVT-GII

Seq: PLRY01000016.1 Gammaproteobacteria bacterium isolate bog_1224 73.20120700_S1D.81_contig_8312, whole genome shotgun sequence (81383 bp)
Overview 1 RT 1: 184-1980 bp Neighborhood of RT #1 [184, 2018] RVT-GII AcrR Feature: gene Location: 184-558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-523 bp Feature: gene Location: 1153-1329 bp Feature: gene Location: 1446-2018 bp Feature: domain Description: AcrR Location: 1476-1980 bp Feature: domain Description: AcrR Location: 1476-1980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-GII