myRT

myRT report for GCA_003165275.1_20120700_S1D

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Seq: PLSW01000283.1 Caulobacteraceae bacterium isolate bog_935 73.20120700_S1D.278_contig_122907, whole genome shotgun sequence (5516 bp)
Overview 1 RT 1: 2-4937 bp Neighborhood of RT #1 [2, 4963] RVT-GII CHASE3 PRK13557 PnbA Feature: gene Location: 2-709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 3-71 0 bp Feature: gene Location: 1265-3151 bp Feature: domain Description: CHASE3 Location: 1391-1787 bp Feature: domain Description: CHASE3 Location: 1 391 -1 787 bp Feature: domain Description: PRK13557 Location: 1958-3131 bp Feature: domain Description: PRK1 3557 Location: 1 958-31 31 bp Feature: gene Location: 3431-4963 bp Feature: domain Description: PnbA Location: 3458-4937 bp Feature: domain Description: PnbA Location: 3458-4937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHASE3 (pfam05227), PRK13557 (histidine kinase; Provisional), RVT-GII

Seq: PLSW01000037.1 Caulobacteraceae bacterium isolate bog_935 73.20120700_S1D.278_contig_88553, whole genome shotgun sequence (4605 bp)
Overview 1 RT 1: 996-4509 bp Neighborhood of RT #1 [996, 4514] GstA DDE_3 RVT-GII GIIM COG3415 Feature: gene Location: 996-1640 bp Feature: domain Description: GstA Location: 1029-1614 bp Feature: domain Description: GstA Location: 102 9-1614 bp Feature: gene Location: 1680-2153 bp Feature: domain Description: DDE_3 Location: 1686-2067 bp Feature: domain Description: DDE_3 Location: 1686-2 067 bp Feature: gene Location: 2245-3504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2461-3115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 461-3115 bp Feature: domain Description: GIIM Note: maturase Location: 3196-3418 bp Feature: domain Description: GIIM Note: maturase Location: 3196-3418 bp Feature: gene Location: 4125-4514 bp Feature: domain Description: COG3415 Location: 4131-4509 bp Feature: domain Description: COG3415 Location: 4131-4509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388), COG3415 (Transposase ), GstA (COG0625)