myRT

myRT report for GCA_003165315.1_20120700_S1D

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Seq: PLSX01000271.1 Acidobacteria bacterium isolate bog_367 73.20120700_S1D.266_contig_10093, whole genome shotgun sequence (40994 bp)
Overview 1 RT 1: 39677-40985 bp Neighborhood of RT #1 [39677, 40993] mscL RVT-CRISPR-like Feature: gene Location: 39677-40120 bp Feature: domain Description: mscL Location: 39680-40031 bp Feature: domain Description: mscL Location: 39680-40031 bp Feature: gene Location: 40248-40583 bp Feature: gene Location: 40592-40993 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 40601-40985 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 40601 -40985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mscL (TIGR00220), RVT-CRISPR

Seq: PLSX01000121.1 Acidobacteria bacterium isolate bog_367 73.20120700_S1D.266_contig_184903, whole genome shotgun sequence (8266 bp)
Overview 1 RT 1: 5878-7890 bp Neighborhood of RT #1 [5878, 8264] NifX PadR RVT-GII Feature: gene Location: 5878-6030 bp Feature: domain Description: NifX Location: 5881-5998 bp Feature: domain Description: NifX Location: 5881-5998 bp Feature: gene Location: 6085-6531 bp Feature: domain Description: PadR Location: 6163-6490 bp Feature: domain Description: PadR Location: 6163-6490 bp Feature: gene Location: 6798-8264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7200-7890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 00-7890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NifX (COG1433), PadR (pfam03551), RVT-GII

Seq: PLSX01000008.1 Acidobacteria bacterium isolate bog_367 73.20120700_S1D.266_contig_251570, whole genome shotgun sequence (3011 bp)
Overview 1 RT 1: 3-3004 bp Neighborhood of RT #1 [3, 3009] RVT-GII GIIM YdeI Feature: gene Location: 3-146 bp Feature: gene Location: 544-2031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036-1675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 6-1675 bp Feature: domain Description: GIIM Note: maturase Location: 1747-1954 bp Feature: domain Description: GIIM Note: maturase Location: 1747-1954 bp Feature: gene Location: 2049-2486 bp Feature: gene Location: 2692-3009 bp Feature: domain Description: YdeI Location: 2695-3004 bp Feature: domain Description: YdeI Location: 2695-3 004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdeI (COG4430), RVT-GII, GIIM (pfam08388)

Seq: PLSX01000038.1 Acidobacteria bacterium isolate bog_367 73.20120700_S1D.266_contig_73324, whole genome shotgun sequence (3542 bp)
Overview 1 RT 1: 29-3502 bp Neighborhood of RT #1 [29, 3502] RVT-GII GIIM Feature: gene Location: 29-1423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1013 bp Feature: domain Description: GIIM Note: maturase Location: 1055-1268 bp Feature: domain Description: GIIM Note: maturase Location: 1055-1268 bp Feature: gene Location: 2180-3502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)