myRT

myRT report for GCA_003165555.1_20110600_S1D

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Seq: PMLY01000001.1 Acidobacteriaceae bacterium isolate bog_98 73.20110600_S1D.31_contig_24187, whole genome shotgun sequence (5019 bp)
Overview 1 RT 1: 3095-4762 bp Neighborhood of RT #1 [3095, 4932] RVT-GII GIIM Feature: gene Location: 3095-3349 bp Feature: gene Location: 3384-3539 bp Feature: gene Location: 3553-4932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3889-4507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3889-4507 bp Feature: domain Description: GIIM Note: maturase Location: 4561-4762 bp Feature: domain Description: GIIM Note: maturase Location: 4561 -4762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMLY01000332.1 Acidobacteriaceae bacterium isolate bog_98 73.20110600_S1D.31_contig_3613, whole genome shotgun sequence (44457 bp)
Overview 1 RT 1: 1-5432 bp Neighborhood of RT #1 [1, 5515] RVT-GII GIIM TPR TPR_11 TPR TPR TPR TPR_2 VCBS VCBS VCBS VCBS VCBS UnbV_ASPIC Feature: gene Location: 1-1359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325-940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 5-940 bp Feature: domain Description: GIIM Note: maturase Location: 997-1201 bp Feature: domain Description: GIIM Note: maturase Location: 997-12 01 bp Feature: gene Location: 1598-3697 bp Feature: domain Description: TPR Location: 1823-2105 bp Feature: domain Description: TPR Location: 182 3-2 105 bp Feature: domain Description: TPR_11 Location: 2282-2369 bp Feature: domain Description: TPR_11 Location: 2 2 82 -2 369 bp Feature: domain Description: TPR Location: 2393-2624 bp Feature: domain Description: TPR Location: 2 393-2 62 4 bp Feature: domain Description: TPR Location: 2900-3119 bp Feature: domain Description: TPR Location: 2 900-3119 bp Feature: domain Description: TPR Location: 3158-3425 bp Feature: domain Description: TPR Location: 3158-342 5 bp Feature: domain Description: TPR_2 Location: 3449-3542 bp Feature: domain Description: TPR_2 Location: 3449-3542 bp Feature: gene Location: 3713-5515 bp Feature: domain Description: VCBS Location: 3953-4004 bp Feature: domain Description: VCBS Location: 3953-4004 bp Feature: domain Description: VCBS Location: 4157-4340 bp Feature: domain Description: VCBS Location: 4157-4340 bp Feature: domain Description: VCBS Location: 4451-4595 bp Feature: domain Description: VCBS Location: 4451-4595 bp Feature: domain Description: VCBS Location: 4748-4925 bp Feature: domain Description: VCBS Location: 4748-492 5 bp Feature: domain Description: VCBS Location: 4988-5132 bp Feature: domain Description: VCBS Location: 4988-5132 bp Feature: domain Description: UnbV_ASPIC Location: 5234-5432 bp Feature: domain Description: UnbV_ASPIC Location: 52 34-5432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TPR (smart00028), TPR_11 (pfam13414), TPR_2 (pfam07719), VCBS (pfam13517), UnbV_ASPIC (pfam07593)