myRT

myRT report for GCA_003165655.1_20110600_P3S

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Seq: PMOY01000073.1 Solirubrobacterales bacterium isolate palsa_465 73.20110600_P3S.6_contig_53772, whole genome shotgun sequence (11570 bp)
Overview 1 RT 1: 170-4653 bp Neighborhood of RT #1 [170, 4653] RimL PRK10281 PRK10281 RVT-GII GIIM Feature: gene Location: 170-436 bp Feature: domain Description: RimL Location: 197-389 bp Feature: domain Description: RimL Location: 1 97-389 bp Feature: gene Location: 702-1208 bp Feature: domain Description: PRK10281 Location: 726-810 bp Feature: domain Description: PRK1 0281 Location: 726-81 0 bp Feature: domain Description: PRK10281 Location: 813-1200 bp Feature: domain Description: PRK1 0281 Location: 81 3-1 200 bp Feature: gene Location: 2157-3443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409-3069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409-3069 bp Feature: domain Description: GIIM Note: maturase Location: 3162-3381 bp Feature: domain Description: GIIM Note: maturase Location: 31 62-3381 bp Feature: gene Location: 3760-3903 bp Feature: gene Location: 4162-4653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT-GII, GIIM (pfam08388), PRK10281 (PhzF family isomerase)

Seq: PMOY01000079.1 Solirubrobacterales bacterium isolate palsa_465 73.20110600_P3S.6_contig_5725, whole genome shotgun sequence (31094 bp)
Overview 1 RT 1: 3-5356 bp Neighborhood of RT #1 [3, 5385] F420_Rv2161c Transposase_mut RVT-GII GIIM YgiN Feature: gene Location: 3-839 bp Feature: domain Description: F420_Rv2161c Location: 66-717 bp Feature: domain Description: F42 0_Rv2 161c Location: 66-717 bp Feature: gene Location: 1118-2296 bp Feature: domain Description: Transposase_mut Location: 1151-2147 bp Feature: domain Description: Transposase_mut Location: 1151-2 147 bp Feature: gene Location: 2839-3921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2986-3619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 986-3619 bp Feature: domain Description: GIIM Note: maturase Location: 3703-3904 bp Feature: domain Description: GIIM Note: maturase Location: 3703-3904 bp Feature: gene Location: 4495-4839 bp Feature: gene Location: 5089-5385 bp Feature: domain Description: YgiN Location: 5098-5356 bp Feature: domain Description: YgiN Location: 5098-5356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388), F420_Rv2161c (TIGR03619), YgiN (COG1359)