myRT

myRT report for GCA_003165705.1_20110800_E1D

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Seq: PMXI01000106.1 Acidobacteria bacterium isolate fen_175 73.20110800_E1D.14_contig_10502, whole genome shotgun sequence (5015 bp)
Overview 1 RT 1: 2671-5000 bp Neighborhood of RT #1 [2671, 5014] INT_ICEBs1_C_like INT_ICEBs1_C_like RVT-GII Feature: gene Location: 2671-3930 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3331-3814 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 3331 -381 4 bp Feature: gene Location: 4036-4707 bp Feature: domain Description: INT_ICEBs1_C_like Location: 4117-4606 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 41 1 7-4606 bp Feature: gene Location: 4730-5014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4733-5000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4733-5000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-GII

Seq: PMXI01000063.1 Acidobacteria bacterium isolate fen_175 73.20110800_E1D.14_contig_3776, whole genome shotgun sequence (45217 bp)
Overview 1 RT 1: 9389-14225 bp Neighborhood of RT #1 [9389, 14311] VirB10 RVT-GII TrbL Feature: gene Location: 9389-10660 bp Feature: domain Description: VirB10 Location: 10094-10622 bp Feature: domain Description: VirB10 Location: 10094-1062 2 bp Feature: gene Location: 10688-11509 bp Feature: gene Location: 11616-13100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12036-12726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 036-12 72 6 bp Feature: gene Location: 13097-13429 bp Feature: gene Location: 13475-14311 bp Feature: domain Description: TrbL Location: 13583-14225 bp Feature: domain Description: TrbL Location: 13583-142 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TrbL (pfam04610), VirB10 (COG2948)

Seq: PMXI01000022.1 Acidobacteria bacterium isolate fen_175 73.20110800_E1D.14_contig_4222, whole genome shotgun sequence (20086 bp)
Overview 1 RT 1: 17507-19966 bp Neighborhood of RT #1 [17507, 20070] Amidohydro_2 PRK09183 RVT-GII GIIM Feature: gene Location: 17507-18712 bp Feature: domain Description: Amidohydro_2 Location: 17741-18668 bp Feature: domain Description: Amidohydro_2 Location: 17741-18668 bp Feature: gene Location: 19120-19359 bp Feature: domain Description: PRK09183 Location: 19174-19333 bp Feature: domain Description: PRK09183 Location: 19174-193 3 3 bp Feature: gene Location: 19393-20070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19408-19693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19408-19693 bp Feature: domain Description: GIIM Note: maturase Location: 19762-19966 bp Feature: domain Description: GIIM Note: maturase Location: 19762-19966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Amidohydro_2 (pfam04909), PRK09183 (transposase/IS protein; Provisional), RVT-GII, GIIM (pfam08388)