myRT

myRT report for GCA_003166055.1_20110700_S3M

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Seq: PMWR01000027.1 Acidobacteriaceae bacterium isolate bog_166 73.20110700_S3M.25_contig_14980, whole genome shotgun sequence (5230 bp)
Overview 1 RT 1: 9-5229 bp Neighborhood of RT #1 [9, 5229] LZ_Tnp_IS66 DDE_Tnp_IS66 RVT-GII DUF5372 PinE Zn_ribbon_recom RVT-GII GIIM Feature: gene Location: 9-443 bp Feature: domain Description: LZ_Tnp_IS66 Location: 15-162 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 5-1 62 bp Feature: domain Description: DDE_Tnp_IS66 Location: 174-417 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 74-41 7 bp Feature: gene Location: 959-1225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 63-1 208 bp Feature: gene Location: 1170-1508 bp Feature: domain Description: DUF5372 Location: 1257-1485 bp Feature: domain Description: DUF5372 Location: 1 257-1 485 bp Feature: gene Location: 1441-1848 bp Feature: gene Location: 1985-4069 bp Feature: domain Description: PinE Location: 2024-2714 bp Feature: domain Description: PinE Location: 2024-271 4 bp Feature: domain Description: Zn_ribbon_recom Location: 2981-3158 bp Feature: domain Description: Zn_ribbon_recom Location: 2981 -31 58 bp Feature: gene Location: 4059-5084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077-4698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077-4698 bp Feature: domain Description: GIIM Note: maturase Location: 4782-5007 bp Feature: domain Description: GIIM Note: maturase Location: 4782-5007 bp Feature: gene Location: 4939-5229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), GIIM (pfam08388)

Seq: PMWR01000371.1 Acidobacteriaceae bacterium isolate bog_166 73.20110700_S3M.25_contig_18100, whole genome shotgun sequence (3244 bp)
Overview 1 RT 1: 1-3203 bp Neighborhood of RT #1 [1, 3241] Beta-lactamase DUF3471 RVT-Retrons PRK05479 Feature: gene Location: 1-885 bp Feature: domain Description: Beta-lactamase Location: 10-535 bp Feature: domain Description: Beta-lactamase Location: 10-535 bp Feature: domain Description: DUF3471 Location: 601-850 bp Feature: domain Description: DUF3471 Location: 601-850 bp Feature: gene Location: 1093-2424 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1555-2197 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1555-2 197 bp Feature: gene Location: 2558-3241 bp Feature: domain Description: PRK05479 Location: 2561-3203 bp Feature: domain Description: PRK05479 Location: 2 561-32 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Beta-lactamase (pfam00144), DUF3471 (pfam11954), PRK05479 (ketol-acid reductoisomerase; Provisional)