myRT

myRT report for GCA_003166435.1_20110700_S2D

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Seq: PMVX01000159.1 Verrucomicrobiales bacterium isolate bog_1386 73.20110700_S2D.44_contig_12960, whole genome shotgun sequence (11595 bp)
Overview 1 RT 1: 154-3952 bp Neighborhood of RT #1 [154, 3969] RVT-GII TPR type_IV_pilW aspS Feature: gene Location: 154-1047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 508-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 508-1 006 bp Feature: gene Location: 1370-2122 bp Feature: domain Description: TPR Location: 1661-1946 bp Feature: domain Description: TPR Location: 1 661 -1 946 bp Feature: domain Description: type_IV_pilW Location: 1946-2054 bp Feature: domain Description: type_IV_pilW Location: 1 946-2054 bp Feature: gene Location: 2170-3969 bp Feature: domain Description: aspS Location: 2173-3952 bp Feature: domain Description: aspS Location: 21 73-3952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), type_IV_pilW (TIGR02521), RVT-GII, aspS (PRK00476)

Seq: PMVX01000019.1 Verrucomicrobiales bacterium isolate bog_1386 73.20110700_S2D.44_contig_3922, whole genome shotgun sequence (37952 bp)
Overview 1 RT 1: 18279-22774 bp Neighborhood of RT #1 [18279, 22878] RVT-GII GIIM PinE rve_3 Feature: gene Location: 18279-18500 bp Feature: gene Location: 18783-19322 bp Feature: gene Location: 19516-20343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19522-19915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1952 2 -19915 bp Feature: domain Description: GIIM Note: maturase Location: 19960-20191 bp Feature: domain Description: GIIM Note: maturase Location: 19960-2 0191 bp Feature: gene Location: 20849-21523 bp Feature: domain Description: PinE Location: 20900-21476 bp Feature: domain Description: PinE Location: 2 0900-2 1476 bp Feature: gene Location: 21679-22878 bp Feature: domain Description: rve_3 Location: 22600-22774 bp Feature: domain Description: rve_3 Location: 2 2 600-2 2 774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PinE (COG1961), rve_3 (pfam13683)