myRT

myRT report for GCA_003166695.1_20110700_S1D

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Seq: PMVC01000020.1 Acidobacteriaceae bacterium isolate bog_151 73.20110700_S1D.5_contig_1187, whole genome shotgun sequence (11892 bp)
Overview 1 RT 1: 6512-9924 bp Neighborhood of RT #1 [6512, 10283] RVT-GII GIIM Phage_int_SAM_4 Feature: gene Location: 6512-7228 bp Feature: gene Location: 7252-7545 bp Feature: gene Location: 7730-9097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8057-8675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8057-8675 bp Feature: domain Description: GIIM Note: maturase Location: 8726-8939 bp Feature: domain Description: GIIM Note: maturase Location: 8726-8939 bp Feature: gene Location: 9236-9496 bp Feature: gene Location: 9669-10283 bp Feature: domain Description: Phage_int_SAM_4 Location: 9681-9924 bp Feature: domain Description: Phage_int_SAM_4 Location: 9681 -9924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Phage_int_SAM_4 (pfam13495)

Seq: PMVC01000285.1 Acidobacteriaceae bacterium isolate bog_151 73.20110700_S1D.5_contig_7155, whole genome shotgun sequence (7122 bp)
Overview 1 RT 1: 3-3382 bp Neighborhood of RT #1 [3, 3382] RVT-UNC Cas1_I-II-III Feature: gene Location: 3-1694 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6-156 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6-156 bp Feature: domain Description: Cas1_I-II-III Location: 696-1650 bp Feature: domain Description: Cas1_I-II-III Location: 696-1650 bp Feature: gene Location: 1783-2226 bp Feature: gene Location: 2372-3382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-DGRs/RVT-GII/RVT-UG4(RVT-UNC), Cas1_I-II-III (cl00656)

Seq: PMVC01000027.1 Acidobacteriaceae bacterium isolate bog_151 73.20110700_S1D.5_contig_7923, whole genome shotgun sequence (16293 bp)
Overview 1 RT 1: 2-4666 bp Neighborhood of RT #1 [2, 5049] Big_3_5 Big_3_5 Big_3_5 RVT-GII GIIM Peptidase_M78 Feature: gene Location: 2-2005 bp Feature: domain Description: Big_3_5 Location: 410-716 bp Feature: domain Description: Big_3 _5 Location: 410-716 bp Feature: domain Description: Big_3_5 Location: 836-965 bp Feature: domain Description: Big_3 _5 Location: 83 6-965 bp Feature: domain Description: Big_3_5 Location: 1019-1190 bp Feature: domain Description: Big_3 _5 Location: 1019-1190 bp Feature: gene Location: 2036-2377 bp Feature: gene Location: 2443-3837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2773-3391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2773 -3 3 91 bp Feature: domain Description: GIIM Note: maturase Location: 3445-3670 bp Feature: domain Description: GIIM Note: maturase Location: 3 445-3 670 bp Feature: gene Location: 3865-3993 bp Feature: gene Location: 4216-5049 bp Feature: domain Description: Peptidase_M78 Location: 4300-4666 bp Feature: domain Description: Peptidase_M78 Location: 43 00-4666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_3_5 (pfam16640), RVT-GII, GIIM (pfam08388), Peptidase_M78 (pfam06114)

Seq: PMVC01000483.1 Acidobacteriaceae bacterium isolate bog_151 73.20110700_S1D.5_contig_7969, whole genome shotgun sequence (4819 bp)
Overview 1 RT 1: 18-1746 bp Neighborhood of RT #1 [18, 1746] RVT-GII GIIM Feature: gene Location: 18-1169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-94 2 bp Feature: domain Description: GIIM Note: maturase Location: 1014-1167 bp Feature: domain Description: GIIM Note: maturase Location: 1014 -1167 bp Feature: gene Location: 1171-1521 bp Feature: gene Location: 1528-1746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)