myRT

myRT report for GCA_003167185.1_20110700_P2M

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Seq: PMTW01000027.1 Bryobacterales bacterium isolate palsa_132 73.20110700_P2M.10_contig_149, whole genome shotgun sequence (4701 bp)
Overview 1 RT 1: 1665-4698 bp Neighborhood of RT #1 [1665, 4698] COG0645 HTH_Tnp_1 RVT-GII GIIM Feature: gene Location: 1665-2231 bp Feature: domain Description: COG0645 Location: 1692-2052 bp Feature: domain Description: COG0645 Location: 1 692-2052 bp Feature: gene Location: 2379-2762 bp Feature: domain Description: HTH_Tnp_1 Location: 2430-2595 bp Feature: domain Description: HTH_Tnp_1 Location: 2430-2595 bp Feature: gene Location: 3037-4428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3382-4003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3382-4003 bp Feature: domain Description: GIIM Note: maturase Location: 4054-4270 bp Feature: domain Description: GIIM Note: maturase Location: 4054-4270 bp Feature: gene Location: 4549-4698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0645 (Predicted kinase ), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388)

Seq: PMTW01000091.1 Bryobacterales bacterium isolate palsa_132 73.20110700_P2M.10_contig_2111, whole genome shotgun sequence (25456 bp)
Overview 1 RT 1: 10636-17435 bp Neighborhood of RT #1 [10636, 17458] TTC RVT-GII URO-D URO-D clpP Feature: gene Location: 10636-12513 bp Feature: gene Location: 12585-13691 bp Feature: domain Description: TTC Location: 12588-13635 bp Feature: domain Description: TTC Location: 12 588-13635 bp Feature: gene Location: 13827-15497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14427-15117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1442 7-15117 bp Feature: gene Location: 15643-16596 bp Feature: domain Description: URO-D Location: 15712-15880 bp Feature: domain Description: URO-D Location: 15712 -15880 bp Feature: domain Description: URO-D Location: 15937-16570 bp Feature: domain Description: URO-D Location: 15937-16570 bp Feature: gene Location: 16712-17458 bp Feature: domain Description: clpP Location: 16850-17435 bp Feature: domain Description: clpP Location: 16850-17435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TTC (TIGR02089), RVT-GII, URO-D (pfam01208), clpP

Seq: PMTW01000461.1 Bryobacterales bacterium isolate palsa_132 73.20110700_P2M.10_contig_8081, whole genome shotgun sequence (43906 bp)
Overview 1 RT 1: 22049-26387 bp Neighborhood of RT #1 [22049, 26395] PRK12335 PRK02627 RVT-Retrons GAF PRK13014 Feature: gene Location: 22049-22552 bp Feature: domain Description: PRK12335 Location: 22133-22523 bp Feature: domain Description: PRK123 3 5 Location: 2213 3 -22523 bp Feature: gene Location: 22555-23790 bp Feature: domain Description: PRK02627 Location: 22603-23770 bp Feature: domain Description: PRK02627 Location: 22603 -23 770 bp Feature: gene Location: 23812-25116 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24268-24886 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24268-24886 bp Feature: gene Location: 25360-25656 bp Feature: domain Description: GAF Location: 25369-25618 bp Feature: domain Description: GAF Location: 253 69-25618 bp Feature: gene Location: 25775-26395 bp Feature: domain Description: PRK13014 Location: 25877-26387 bp Feature: domain Description: PRK13 014 Location: 25877-263 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12335 (tellurite resistance protein TehB; Provisional), PRK02627 (acetylornithine aminotransferase; Provisional), RVT-Retrons, GAF (smart00065), PRK13014 (methionine sulfoxide reductase A; Provisional)