myRT

myRT report for GCA_003167255.1_20110700_P2D

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Seq: PMTR01000030.1 Bryobacterales bacterium isolate palsa_129 73.20110700_P2D.63_contig_1415, whole genome shotgun sequence (50719 bp)
Overview 1 RT 1: 305-3852 bp Neighborhood of RT #1 [305, 3852] Cas2_I_II_III RVT-CRISPR Cas_Cas1 Feature: gene Location: 305-580 bp Feature: domain Description: Cas2_I_II_III Location: 314-542 bp Feature: domain Description: Cas2_I_II_III Location: 31 4-542 bp Feature: gene Location: 553-2613 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 772-1360 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 772-1 360 bp Feature: domain Description: Cas_Cas1 Location: 1588-2443 bp Feature: domain Description: Cas_Cas1 Location: 1 588-2443 bp Feature: gene Location: 3044-3628 bp Feature: gene Location: 3691-3852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas_Cas1 (pfam01867)

Seq: PMTR01000040.1 Bryobacterales bacterium isolate palsa_129 73.20110700_P2D.63_contig_6751, whole genome shotgun sequence (42336 bp)
Overview 1 RT 1: 3-4123 bp Neighborhood of RT #1 [3, 4161] RVT-GII GIIM STKc_PknB_like SMC_prok_B GT4_MtfB-like Feature: gene Location: 3-1277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309-966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309-966 bp Feature: domain Description: GIIM Note: maturase Location: 1041-1239 bp Feature: domain Description: GIIM Note: maturase Location: 1041-12 39 bp Feature: gene Location: 1831-2937 bp Feature: domain Description: STKc_PknB_like Location: 1843-2311 bp Feature: domain Description: STKc_PknB_like Location: 1843-2 311 bp Feature: domain Description: SMC_prok_B Location: 2377-2893 bp Feature: domain Description: SMC_prok_B Location: 2 377-2 893 bp Feature: gene Location: 3055-4161 bp Feature: domain Description: GT4_MtfB-like Location: 3061-4123 bp Feature: domain Description: GT4_MtfB-like Location: 3061-412 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), STKc_PknB_like (cd14014), SMC_prok_B (TIGR02168), GT4_MtfB-like (cd03809)