myRT

myRT report for GCA_003167375.1_20110700_P2D

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Seq: PMTK01000454.1 Bryobacterales bacterium isolate palsa_126 73.20110700_P2D.43_contig_3019, whole genome shotgun sequence (134309 bp)
Overview 1 RT 1: 81669-85328 bp Neighborhood of RT #1 [81669, 86557] Glyco_hydro_76 RVT-GII Glyco_hydro_42 Feature: gene Location: 81669-82808 bp Feature: domain Description: Glyco_hydro_76 Location: 81810-82548 bp Feature: domain Description: Glyco_hydro_76 Location: 81 81 0-82548 bp Feature: gene Location: 83015-83143 bp Feature: gene Location: 84070-84567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84079-84295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84079-84295 bp Feature: gene Location: 84508-84741 bp Feature: gene Location: 84863-86557 bp Feature: domain Description: Glyco_hydro_42 Location: 85181-85328 bp Feature: domain Description: Glyco_hydro_42 Location: 851 81 -85328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_76 (pfam03663), RVT-GII, Glyco_hydro_42 (pfam02449)

Seq: PMTK01000315.1 Bryobacterales bacterium isolate palsa_126 73.20110700_P2D.43_contig_52700, whole genome shotgun sequence (4015 bp)
Overview 1 RT 1: 3-4003 bp Neighborhood of RT #1 [3, 4003] PinE Zn_ribbon_recom RVT-GII Feature: gene Location: 3-2114 bp Feature: domain Description: PinE Location: 51-639 bp Feature: domain Description: PinE Location: 51-639 bp Feature: domain Description: Zn_ribbon_recom Location: 1005-1173 bp Feature: domain Description: Zn_ribbon_recom Location: 1005-1173 bp Feature: gene Location: 2575-3444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2590-3049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 590-3049 bp Feature: gene Location: 3836-4003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), RVT-GII

Seq: PMTK01000457.1 Bryobacterales bacterium isolate palsa_126 73.20110700_P2D.43_contig_6058, whole genome shotgun sequence (55587 bp)
Overview 1 RT 1: 1-3373 bp Neighborhood of RT #1 [1, 3384] PRK13557 PRK13557 RVT-GII TagG TagH Feature: gene Location: 1-906 bp Feature: domain Description: PRK13557 Location: 4-547 bp Feature: domain Description: PRK13 557 Location: 4-547 bp Feature: domain Description: PRK13557 Location: 559-901 bp Feature: domain Description: PRK13 557 Location: 559-901 bp Feature: gene Location: 1085-1465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1088-1259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1088-1259 bp Feature: gene Location: 1819-2640 bp Feature: domain Description: TagG Location: 1903-2638 bp Feature: domain Description: TagG Location: 1903 -263 8 bp Feature: gene Location: 2644-3384 bp Feature: domain Description: TagH Location: 2650-3373 bp Feature: domain Description: TagH Location: 2650-3 3 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13557 (histidine kinase; Provisional), RVT-GII, TagG (COG1682), TagH (COG1134)