myRT

myRT report for GCA_003167775.1_20110700_S2D

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Seq: PMVO01000098.1 Acidimicrobiaceae bacterium isolate bog_524 73.20110700_S2D.14_contig_20294, whole genome shotgun sequence (8216 bp)
Overview 1 RT 1: 2750-6510 bp Neighborhood of RT #1 [2750, 6510] COG3547 RVT-GII GIIM Feature: gene Location: 2750-3043 bp Feature: gene Location: 3442-4410 bp Feature: domain Description: COG3547 Location: 3463-4270 bp Feature: domain Description: COG3547 Location: 3463-4270 bp Feature: gene Location: 4584-6017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4905-5583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4905-5583 bp Feature: domain Description: GIIM Note: maturase Location: 5661-5886 bp Feature: domain Description: GIIM Note: maturase Location: 5661 -5886 bp Feature: gene Location: 6074-6217 bp Feature: gene Location: 6250-6510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: PMVO01000157.1 Acidimicrobiaceae bacterium isolate bog_524 73.20110700_S2D.14_contig_702, whole genome shotgun sequence (5819 bp)
Overview 1 RT 1: 3-3646 bp Neighborhood of RT #1 [3, 3646] RVT-GII GIIM PinE Zn_ribbon_recom excise excise Feature: gene Location: 3-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-573 bp Feature: domain Description: GIIM Note: maturase Location: 648-849 bp Feature: domain Description: GIIM Note: maturase Location: 648-849 bp Feature: gene Location: 1060-3315 bp Feature: domain Description: PinE Location: 1114-1705 bp Feature: domain Description: PinE Location: 1114-1705 bp Feature: domain Description: Zn_ribbon_recom Location: 2053-2218 bp Feature: domain Description: Zn_ribbon_recom Location: 2 053-2 2 18 bp Feature: domain Description: excise Location: 2905-3028 bp Feature: domain Description: excise Location: 2 905-302 8 bp Feature: domain Description: excise Location: 3121-3235 bp Feature: domain Description: excise Location: 312 1-32 35 bp Feature: gene Location: 3380-3646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), excise (TIGR01764), RVT-GII, GIIM (pfam08388)