myRT

myRT report for GCA_003168475.1_20110700_E1S

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Seq: PMSA01000216.1 Nitrospiraceae bacterium isolate fen_1306 73.20110700_E1S.2_contig_17952, whole genome shotgun sequence (2938 bp)
Overview 1 RT 1: 3-2815 bp Neighborhood of RT #1 [3, 2937] RVT-GII GIIM AsmA_2 Feature: gene Location: 3-1049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1 038 bp Feature: gene Location: 1219-1530 bp Feature: domain Description: GIIM Note: maturase Location: 1225-1396 bp Feature: domain Description: GIIM Note: maturase Location: 1 225-1 396 bp Feature: gene Location: 1711-2937 bp Feature: domain Description: AsmA_2 Location: 2233-2815 bp Feature: domain Description: AsmA_2 Location: 2233-281 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AsmA_2 (pfam13502)

Seq: PMSA01000176.1 Nitrospiraceae bacterium isolate fen_1306 73.20110700_E1S.2_contig_22874, whole genome shotgun sequence (3459 bp)
Overview 1 RT 1: 3-2211 bp Neighborhood of RT #1 [3, 2211] RVT-GII KOG4768 rve Feature: gene Location: 3-1508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330-1089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330-1089 bp Feature: domain Description: KOG4768 Location: 1200-1362 bp Feature: domain Description: KOG4768 Location: 12 00-1362 bp Feature: gene Location: 1515-1778 bp Feature: domain Description: rve Location: 1611-1755 bp Feature: domain Description: rve Location: 1611-1755 bp Feature: gene Location: 1942-2211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), rve (pfam00665)

Seq: PMSA01000030.1 Nitrospiraceae bacterium isolate fen_1306 73.20110700_E1S.2_contig_2704, whole genome shotgun sequence (3362 bp)
Overview 1 RT 1: 39-1907 bp Neighborhood of RT #1 [39, 1907] RVT-GII Feature: gene Location: 39-1232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147-840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147-840 bp Feature: gene Location: 1357-1587 bp Feature: gene Location: 1668-1907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PMSA01000124.1 Nitrospiraceae bacterium isolate fen_1306 73.20110700_E1S.2_contig_4175, whole genome shotgun sequence (13033 bp)
Overview 1 RT 1: 11456-12879 bp Neighborhood of RT #1 [11456, 13031] TRAP_TAXI RVT-GII GIIM Feature: gene Location: 11456-12052 bp Feature: domain Description: TRAP_TAXI Location: 11486-11996 bp Feature: domain Description: TRAP_TAXI Location: 114 86-11996 bp Feature: gene Location: 12056-12226 bp Feature: gene Location: 12246-13031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12249-12585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1224 9-12585 bp Feature: domain Description: GIIM Note: maturase Location: 12681-12879 bp Feature: domain Description: GIIM Note: maturase Location: 12681-12879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRAP_TAXI (TIGR02122), RVT-GII, GIIM (pfam08388)

Seq: PMSA01000027.1 Nitrospiraceae bacterium isolate fen_1306 73.20110700_E1S.2_contig_4910, whole genome shotgun sequence (3910 bp)
Overview 1 RT 1: 2382-3908 bp Neighborhood of RT #1 [2382, 3907] RVT-GII RVT-GII GIIM Feature: gene Location: 2382-2522 bp Feature: gene Location: 2527-2661 bp Feature: gene Location: 2752-3318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3088-3316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3088-3316 bp Feature: gene Location: 3341-3907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3344-3701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3344-3701 bp Feature: domain Description: GIIM Note: maturase Location: 3761-3908 bp Feature: domain Description: GIIM Note: maturase Location: 3761-3908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMSA01000022.1 Nitrospiraceae bacterium isolate fen_1306 73.20110700_E1S.2_contig_9613, whole genome shotgun sequence (7412 bp)
Overview 1 RT 1: 4722-7359 bp Neighborhood of RT #1 [4722, 7409] RVT-GII MDR_like_2 Feature: gene Location: 4722-4964 bp Feature: gene Location: 5025-5228 bp Feature: gene Location: 5336-5815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5723-5810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5723-5810 bp Feature: gene Location: 5836-5991 bp Feature: gene Location: 6450-7409 bp Feature: domain Description: MDR_like_2 Location: 6456-7359 bp Feature: domain Description: MDR_like_2 Location: 6 456 -7359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MDR_like_2 (cd05289)