myRT

myRT report for GCA_003168715.1_20110600_S3M

Download annotations/find similar RTs

Seq: PMRN01000005.1 Bryobacterales bacterium isolate bog_117 73.20110600_S3M.35_contig_26275, whole genome shotgun sequence (2897 bp)
Overview 1 RT 1: 413-2452 bp Neighborhood of RT #1 [413, 2895] RVT-GII RVT-GII Feature: gene Location: 413-1840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767-1460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767-1 460 bp Feature: gene Location: 1841-2137 bp Feature: gene Location: 2176-2895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2179-2452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 79-2452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PMRN01000353.1 Bryobacterales bacterium isolate bog_117 73.20110600_S3M.35_contig_2888, whole genome shotgun sequence (24133 bp)
Overview 1 RT 1: 271-5567 bp Neighborhood of RT #1 [271, 5578] RVT-Retrons ADOP PIN_VapC4-5_FitB-like Feature: gene Location: 271-462 bp Feature: gene Location: 593-760 bp Feature: gene Location: 1031-2362 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1487-2132 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1487-2 132 bp Feature: gene Location: 2247-4856 bp Feature: domain Description: ADOP Location: 2412-4848 bp Feature: domain Description: ADOP Location: 2 412 -4848 bp Feature: gene Location: 5189-5578 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 5207-5567 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 52 07-5567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ADOP (TIGR03434), PIN_VapC4-5_FitB-like (cd18754)

Seq: PMRN01000583.1 Bryobacterales bacterium isolate bog_117 73.20110600_S3M.35_contig_5301, whole genome shotgun sequence (19934 bp)
Overview 1 RT 1: 15748-19625 bp Neighborhood of RT #1 [15748, 19663] Csm3_III-A Csm4_III-A Csm4_III-A RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 15748-16479 bp Feature: domain Description: Csm3_III-A Location: 15823-16462 bp Feature: domain Description: Csm3 _III-A Location: 15823 -16462 bp Feature: gene Location: 16476-17381 bp Feature: domain Description: Csm4_III-A Location: 16497-16665 bp Feature: domain Description: Csm4_III-A Location: 16497-16665 bp Feature: domain Description: Csm4_III-A Location: 16821-17352 bp Feature: domain Description: Csm4_III-A Location: 16821-173 52 bp Feature: gene Location: 17388-19391 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 17592-18186 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 17592-18186 bp Feature: domain Description: Cas1_I-II-III Location: 18405-19335 bp Feature: domain Description: Cas1_I-II-III Location: 18405-193 3 5 bp Feature: gene Location: 19349-19663 bp Feature: domain Description: Cas2_I_II_III Location: 19397-19625 bp Feature: domain Description: Cas2_I_II_III Location: 193 97-19625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csm3_III-A (cd09684), Csm4_III-A (cl23831), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)