myRT

myRT report for GCA_003168815.1_20110600_S3D

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Seq: PMRH01000003.1 Acidimicrobiaceae bacterium isolate bog_493 73.20110600_S3D.8_contig_1938, whole genome shotgun sequence (8316 bp)
Overview 1 RT 1: 4022-8315 bp Neighborhood of RT #1 [4022, 8315] COG5421 RVT-GII GIIM Feature: gene Location: 4022-4621 bp Feature: gene Location: 4630-6393 bp Feature: domain Description: COG5421 Location: 5092-6193 bp Feature: domain Description: COG5421 Location: 5092-61 93 bp Feature: gene Location: 6419-7663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6629-7289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6629-7289 bp Feature: domain Description: GIIM Note: maturase Location: 7379-7598 bp Feature: domain Description: GIIM Note: maturase Location: 7379-7598 bp Feature: gene Location: 7768-8028 bp Feature: gene Location: 8181-8315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: PMRH01000047.1 Acidimicrobiaceae bacterium isolate bog_493 73.20110600_S3D.8_contig_2024, whole genome shotgun sequence (15807 bp)
Overview 1 RT 1: 7796-14136 bp Neighborhood of RT #1 [7796, 14246] DegQ RVT-GII PRK08264 nicotinamidase_related Feature: gene Location: 7796-9970 bp Feature: domain Description: DegQ Location: 9059-9962 bp Feature: domain Description: DegQ Location: 9059-9962 bp Feature: gene Location: 10095-10292 bp Feature: gene Location: 10925-11602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11186-11567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11186-11567 bp Feature: gene Location: 12933-13280 bp Feature: domain Description: PRK08264 Location: 12945-13230 bp Feature: domain Description: PRK082 64 Location: 12 945-132 30 bp Feature: gene Location: 13686-14246 bp Feature: domain Description: nicotinamidase_related Location: 13719-14136 bp Feature: domain Description: nicotinamidase_related Location: 13719-14136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK08264 (SDR family oxidoreductase), nicotinamidase_related (cd01014)

Seq: PMRH01000114.1 Acidimicrobiaceae bacterium isolate bog_493 73.20110600_S3D.8_contig_25229, whole genome shotgun sequence (4402 bp)
Overview 1 RT 1: 1018-4399 bp Neighborhood of RT #1 [1018, 4399] RVT-GII GIIM Feature: gene Location: 1018-1164 bp Feature: gene Location: 1718-2023 bp Feature: gene Location: 2114-3388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2354-3011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 54-3 011 bp Feature: domain Description: GIIM Note: maturase Location: 3092-3323 bp Feature: domain Description: GIIM Note: maturase Location: 3 092-3 3 23 bp Feature: gene Location: 3456-3941 bp Feature: gene Location: 4097-4399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMRH01000010.1 Acidimicrobiaceae bacterium isolate bog_493 73.20110600_S3D.8_contig_5618, whole genome shotgun sequence (3313 bp)
Overview 1 RT 1: 689-3154 bp Neighborhood of RT #1 [689, 3228] RVT-GII GIIM Feature: gene Location: 689-1270 bp Feature: gene Location: 1489-1632 bp Feature: gene Location: 1975-3228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2191-2851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2191-2851 bp Feature: domain Description: GIIM Note: maturase Location: 2932-3154 bp Feature: domain Description: GIIM Note: maturase Location: 2932-3154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)