myRT

myRT report for GCA_003169125.1_20110600_S2D

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Seq: PMQJ01000247.1 Bryobacterales bacterium isolate bog_109 73.20110600_S2D.27_contig_11719, whole genome shotgun sequence (28918 bp)
Overview 1 RT 1: 23215-28522 bp Neighborhood of RT #1 [23215, 28522] PIN_VapC4-5_FitB-like ADOP RVT-Retrons Feature: gene Location: 23215-23604 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 23233-23593 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 23233-23593 bp Feature: gene Location: 23937-26546 bp Feature: domain Description: ADOP Location: 24102-26538 bp Feature: domain Description: ADOP Location: 241 02-26538 bp Feature: gene Location: 26431-27762 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26887-27532 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26887-27532 bp Feature: gene Location: 28033-28200 bp Feature: gene Location: 28331-28522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC4-5_FitB-like (cd18754), ADOP (TIGR03434), RVT-Retrons

Seq: PMQJ01000484.1 Bryobacterales bacterium isolate bog_109 73.20110600_S2D.27_contig_15209, whole genome shotgun sequence (4645 bp)
Overview 1 RT 1: 204-4102 bp Neighborhood of RT #1 [204, 4119] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Csm4_III-A Csm4_III-A Csm3_III-A Feature: gene Location: 204-518 bp Feature: domain Description: Cas2_I_II_III Location: 252-480 bp Feature: domain Description: Cas2 _I_II_III Location: 2 52 -480 bp Feature: gene Location: 476-2479 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 680-1274 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 680-12 74 bp Feature: domain Description: Cas1_I-II-III Location: 1493-2423 bp Feature: domain Description: Cas1_I-II-III Location: 1493-2 42 3 bp Feature: gene Location: 2486-3391 bp Feature: domain Description: Csm4_III-A Location: 2507-2675 bp Feature: domain Description: Csm4_III-A Location: 2 507-2 675 bp Feature: domain Description: Csm4_III-A Location: 2831-3362 bp Feature: domain Description: Csm4_III-A Location: 2 831-3362 bp Feature: gene Location: 3388-4119 bp Feature: domain Description: Csm3_III-A Location: 3463-4102 bp Feature: domain Description: Csm3_III-A Location: 3463-4102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Csm4_III-A (cl23831), Csm3_III-A (cd09684)